Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151040g00050 ACAGTGGTAGATCAGAACAAGAGGGAAAATGGTAACAACAATAATAACGGTGGTTCTGGGGCGGCGGCTGCTGCGGTTGTGGTGAGTTCACGGTGGAATCCGACGCCAGAGCAGCTGAGGGCGCTAGAGGAGCTGTATAGAAGAGGGACTCGGACGCCGTCGGCGGAGCAAATCCAGCACATAACCGCCCAGCTGAGAAGGTTTGGGAAGATTGAAGGCAAGAATGTGTTCTATTGGTTTCAAAATCACAAAGCTAGGGAGCGGCAAAAGCGTCGCCGCCAGATGGAATCTTCTGATAATAACAACAACAACAACAATCACAATCATAACAATCATAATCCCAATCATCAACTTCAAGCCCACAACAACAACAATCATCACCACCACCACCGTGATTTTGATGCTTCTTCCGAAAAGAAAGAACAAGGAGGAAGTAGGAGGACAGTGGGTGAAGTTGAAGAGAGGAAGAACAACTGGGTATCCTCTACAAACTGCACTACTACTAATCTTGCAGAGGAATCTATTTCAATGGAAAGAGGGGGAGTAGCAGGAAAAGCAGTGGGATCAGAGAGTAGAGCAGATGGATGGGTCCAATTCGAAGAAGGGGAATTACAACAAAGAAGGAACTTTATGGAAAGGAATGCCACGTGGCACATGATGATGCATCATCACTCCCCATGTGCTCCTGCTGCACCACCTGCACCTGCACCATCTGTCACACACCTCATAAATAACCCTCCTCCTTCATCTTCCTCTTCTTCTTCTCATCTTCTTCCTATTCATCATCTTCCTCTTCATCAAATCGACCCATCAAAACTCATTAATAACCACCACCATGATCTCAGCTTCTTTATTTCAACTTATCATCAGAATAATGAGAATGAGAATGAGAATCAAACCCTTCAACTATTCCCTCTAAGGAGTGGTGGTGAAGGTGAAGGTGACGATCTTAATCATGACATTAATGGAAAAGGGACAGAGATATCAGCATCAAGTGATGCCAATAATAACTTGATGATGATGATGACACCAAATAACCACCATCGCTTCTTTGAGTTCCTCCCTTTGAAGAACAACAACAACAACTAA 1089 0.4463 TVVDQNKRENGNNNNNGGSGAAAAAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDNNNNNNNHNHNNHNPNHQLQAHNNNNHHHHHRDFDASSEKKEQGGSRRTVGEVEERKNNWVSSTNCTTTNLAEESISMERGGVAGKAVGSESRADGWVQFEEGELQQRRNFMERNATWHMMMHHHSPCAPAAPPAPAPSVTHLINNPPPSSSSSSSHLLPIHHLPLHQIDPSKLINNHHHDLSFFISTYHQNNENENENQTLQLFPLRSGGEGEGDDLNHDINGKGTEISASSDANNNLMMMMTPNNHHRFFEFLPLKNNNNN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151040g00050 362 MobiDBLite consensus disorder prediction 127 154 - -
Stsc151040g00050 362 MobiDBLite consensus disorder prediction 1 20 - -
Stsc151040g00050 362 CDD homeodomain 31 91 IPR001356 GO:0003677
Stsc151040g00050 362 MobiDBLite consensus disorder prediction 1 22 - -
Stsc151040g00050 362 Pfam Homeodomain 30 89 IPR001356 GO:0003677
Stsc151040g00050 362 ProSiteProfiles 'Homeobox' domain profile. 35 90 IPR001356 GO:0003677
Stsc151040g00050 362 SMART HOX_1 27 94 IPR001356 GO:0003677
Stsc151040g00050 362 SUPERFAMILY Homeodomain-like 30 95 IPR009057 -
Stsc151040g00050 362 MobiDBLite consensus disorder prediction 82 155 - -
Stsc151040g00050 362 Gene3D - 28 90 - -
Stsc151040g00050 362 FunFam WUSCHEL-related homeobox 4 29 96 - -
Stsc151040g00050 362 MobiDBLite consensus disorder prediction 98 121 - -
Stsc151040g00050 362 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 11 337 IPR044555 GO:0003700|GO:0099402
Stsc151040g00050 362 MobiDBLite consensus disorder prediction 307 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151040g00050 Stsc-Chr151040 363527 365842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151040g00050 2 358 Wox Gene Family AT3G18010 36.387 2.15e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc151040g00050 Homeodomain 1.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151040g00050 - - adu:107490490 375.941