Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151040g00046 ATGCATTGGACATTCTCAAACAAAGTCTCATCCAGTCCTCAGTTCTTGTCCTTCAAGACGACGCTGGAAGATGCGCAAAGAAAGGCAATTACAGATCCACTAGCTTCATCTGGATATATGACCATATCAACTAAGGCTTCTTATGACACTGACCAGAAACCATTGTTGAGTGTCGTCCAGAGGAATTTGTCCATAGGAAATCAAGCAGGAAACAACATTGGCATGACAGTGTATCCGCTGCCATGTTCTGGTGCACATTCAGCTAGCCAACTACAAGAATCAAGAATATTTTCACTTTCCAGCCAAACAAATCAAGTGAGTCCTGTTCTTCAATCTAACCTTGCTACTACTACTACCGGATGCAGCATGGGCGCTTCTGTCATGAAACCACAACCCCTCGGTCCCAAATCCTCCGGCTCACCTCTATCTGCTCTTCCATCTGCAGGTTCCATCGTTGGCACTACTGACTTAAGGAATTCTTCCAAGTCTTCTGGGACACCTACTCAGCTGACCATTTTCTATGCTGGTTCTGTATGTGTCTACGACGACATATCACTTGAGAAGGCCCAGGCTATCATGTTACTTGCTGGAAATGGCTCACCTCTAAATCAGAACAACAGAGTTTCCACAACTAAGTTGCAGCCAGCAATGTCTGTTCCCTCCAAGGATAATGGTTTCATTGCAAGCATGCCAATCCCACTTCCAGCGACTTCTCTCGCTGTTTCTCTGCCTGGAGGGGTGTCTTCCAGCAGCAATGAAATCTCAATCATTAGACCAGTGGCGGTAGGACCTTCAACTGCCTGTACCAACAACATGGAATCTCCTAATGTTGCTTCAGTAAGATCTGCAGCTCAAAAAATGATTAATACAGGTTTGCCTCAGGCACGCAAAGCATCGTTAGCTCGGTTCTTAGAGAAGCGAAAGGAAAGGGTCATGAACACATCTCCATACACTTTAAGCAAGAAATCTTCAGCTGAAAGCAGCAATCCTGGATCAGATGGTATTAGTCTTTCCATGAACTCCTCCGGTTCCTGTCCGGTACTGGCGATTAACTAA 1056 0.4545 MHWTFSNKVSSSPQFLSFKTTLEDAQRKAITDPLASSGYMTISTKASYDTDQKPLLSVVQRNLSIGNQAGNNIGMTVYPLPCSGAHSASQLQESRIFSLSSQTNQVSPVLQSNLATTTTGCSMGASVMKPQPLGPKSSGSPLSALPSAGSIVGTTDLRNSSKSSGTPTQLTIFYAGSVCVYDDISLEKAQAIMLLAGNGSPLNQNNRVSTTKLQPAMSVPSKDNGFIASMPIPLPATSLAVSLPGGVSSSSNEISIIRPVAVGPSTACTNNMESPNVASVRSAAQKMINTGLPQARKASLARFLEKRKERVMNTSPYTLSKKSSAESSNPGSDGISLSMNSSGSCPVLAIN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151040g00046 351 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 89 329 IPR040390 -
Stsc151040g00046 351 MobiDBLite consensus disorder prediction 312 339 - -
Stsc151040g00046 351 Pfam tify domain 166 197 IPR010399 -
Stsc151040g00046 351 MobiDBLite consensus disorder prediction 313 339 - -
Stsc151040g00046 351 Pfam Jas motif 293 317 IPR018467 -
Stsc151040g00046 351 ProSiteProfiles Tify domain profile. 163 198 IPR010399 -
Stsc151040g00046 351 SMART tify_2 163 198 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151040g00046 Stsc-Chr151040 328337 331101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151040g00046 1 326 Tify Gene Family AT3G17860 39.773 1.53e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc151040g00046 tify 9.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151040g00046 K13464 - gmx:100807288 370.548