Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151040g00042 ATGGTCTTCAAGGGGAGATTCTTCTCCTCCAAGAAATCCGATTCCGATGGCTCCTCCAACAGTCCCCGATCCCTCCCATCCAACTCCCCATCCAGATCCGACAAGAAGAAGTCCAAATCCCTAACCCCTCCCGCCGCTGCCGCACCCGTCGCCTGCCGCCAGACGCAGGTCAAGGACGCCACCACCAAGAAGAAAGACGCAGTTAAGCCCAAGGAAGCTCAGGTTCCACCTGCCGCCAAGGATTCCGCGTCTCCGTTGAAGTCTAAGAAGTCTTTGTCGGCGGCAGTGGCGGCTGCGGCGGTGACGGAGGCACCAGCCAAGGATTCTACGTCGCCGTCGTCGTCCTCCGTGTCGGTGTCGCCGATCCTGGCTTCGTCGCTAGGGTTGAACAGAATCAAGACGCGATCGGGGCCTTTGCCGCAGGAGAGCTTCTTTGGGTTCAGGGGAGATAAAGGACCGGCTGCGGCGCTCGGCGCCAGCAACCTTTCGAGGCCTGGCGGTGGTGGTGGCGACGGGAGTTCTGGTTCCGGCAGCGGCGGTAAGAAGAAAGAGAGCCGAGTAGGGTTTCAAGAGGGTTTGGCAGCTGGTTCTGGCAGCGGTTGGATTGATAATGGGAGCAATTCAGATAGCATGTCCACTGGGAGTGGACCTTCTAGGGAACAGAGCCCAATCGTGTTGCCAAGGTCGCGGTTGCAGAACGGAGAATCATCTTCCGAAGCTGGGAGACAGACATCGTCATGGGCTCATACTGGAGGGGTAAGAGGTGCAGATTGCACTCCTGAGGCAGCATATGATTACGAAAACCCCAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATCTTGCGGGAAGTATTGGTTGTTATAAAGGCAAAATTTGATAAAGCAAAGGAAGAAGTGAACTCTGATCTGGCTATTTTTGCAGCAGACCTGGTTGGGATTCTTGAAAAAAATGCAGATACTCATCCTGAGTGGCAGGAGACAATTGAGGACTTGCTGATTTTGGCTAGGAGCTGTGCTATGTCTTCAGCTGGGGAGTTTTGGCTTAGGTGTGAAAGCATAGATGTTAAAAGCTCTAGTGCTGCAAAATCCTCAAAGAACTCAACCAAAAAGGCATATAGTCAGGAACAAAGAACGTTGAATTGGAAGAAAGGAGTCACACAACCAGAAAACTTATCACTTCCTACTGATGATGAGCCATCAAAACATTTTGAGTCTCCTTCAGGAAGGGACCGGATGGCTTCTTGGAAGAAATTCCCTTCACCATCAGGAAAAAGCCCAAAAGAAGCTGATCAGTTGAAGGACCAGAGTTATGGAAAGGTTGAACCTTCAAAGACATCAAGTAGTAAGAGATTCACTTCCGATGGTGATCTCTCTTCTGCTAAGCCACCTGAGCTTCTTCCTGCCAAAGATTCTCAGGATCATGCTTCCAAGCATCATCATAAAGTTTCCTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAGCTCAATAATTTGTCGTATATGCGAGGAAGAAGTAGCTACTTCACATGTTGAAGATCACTCAAGGATTTGTGCAGTTGCTGATCGATGTGATCAGAAGGGTCTGAGTGTTAATGAACGTCTTGTCAGAATTGCTGAAACACTAGAAAAGATGATGGAGTCATGTACACAGAAGGATACCCAACAAATAGTGGGAAGTCCAGATGTTGCAAAAGTGTCAAACTCAAGCATGACTGAAGAATCTGATGTAGTTTCTCCTAAACTTAGTGATTGGTCTCGCAGAGGGTCAGAGGATATGCTAGACTGTTTCCCTGAAAATGATAATACTGTTTTCATGGATGACCTAAAGGGTTTACCACTTATGTCATGTAAAACTCGATTTGGTCCTAAGTCTGAACAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGAAATGCTCTTGGCTGGAAAGGGTGCTTACTCCGAACATGATGATATGCCACAGATGAATGAACTTGCTGATATAGCACGCTGTGTAGCAAACACACCTCTGGATGATGATCGCTCAACCTCATATTTATTATCTTGTCTTGATGACTTACGAGTTGTTGTAGACCGGAGGAAATTCGATGCACTTACTGTGGAGACCTTTGGAACACGTATCGAGAAGCTAATACGTGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTGGAAAAGGTAGATATGGAGAGCACTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTCCGTAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGACCGTACCTCTATTGATGACTTTGAGATTATAAAGCCTATAAGTCGTGGGGCATTTGGACGGGTTTTCCTGGCCAAAAAGAGAACAACCGGTGATCTTTTTGCAATTAAGGTTCTGAAGAAGGCTGACATGATTCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTTCGGAATCCTTTTGTGTATCTTAATGGAGGTGACCTATATTCGTTATTAAGGAATTTAGGTTGCTTAGATGAGGAAGTTGCTCGTGTGTATATTGCAGAAGTGGTACTTGCATTAGAGTATTTGCATTCACTACGGGTGGTTCATCGAGACTTGAAGCCTGACAATTTATTGATTGCTCATGATGGTCACATTAAGTTAACAGACTTTGGACTTTCAAAAGTCGGTCTCATCAACAGCACGGATGACTTGTCTGGTCCAGCAGTGAGTGGGACATCTTTGCTTGGGGAGGATGAGCCTAACATGTCTACATCGGAGCATCAAAGGGAACTGAGGAAGAAACGATCTGCTGTGGGTACACCTGATTATTTGGCACCAGAGATTCTTTTGGGAACTGGACATGGGTATACAGCTGATTGGTGGTCTGTTGGGATCATTTTATTCGAGTTGCTTGTTGGTCTGCCACCTTTTAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAAGAAATGAGTCCTGAAGCTCAAGATCTTATTGATAGATTATTGACTGAAGATCCTAACCAGAGACTTGGGGCGAGAGGGGCATCAGAGGTGAAGGAACATGTTTTCTTTAAGGATATAAACTGGGACACACTTGCTAGACAGAAGGCTGCGTTTGTTCCTGCTTCTGAGAGTGCTCTAGACACAAGCTACTTCACTAGTCGCTACTCATGGAACACTTCAGAAGGTCTCGTATATCCAGCAAGTGATGCTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGCCTTGCCGAGTTTGATTCTAGCTCATCGGTCAACTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTAGCATCAATCAACTATGATCTTCTCTCTAAGGGATGGAAAGATGATCCACCAGCAAATCCCGGTGCATAG 3531 0.4622 MVFKGRFFSSKKSDSDGSSNSPRSLPSNSPSRSDKKKSKSLTPPAAAAPVACRQTQVKDATTKKKDAVKPKEAQVPPAAKDSASPLKSKKSLSAAVAAAAVTEAPAKDSTSPSSSSVSVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGPAAALGASNLSRPGGGGGDGSSGSGSGGKKKESRVGFQEGLAAGSGSGWIDNGSNSDSMSTGSGPSREQSPIVLPRSRLQNGESSSEAGRQTSSWAHTGGVRGADCTPEAAYDYENPKESESPRFQAILREVLVVIKAKFDKAKEEVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLILARSCAMSSAGEFWLRCESIDVKSSSAAKSSKNSTKKAYSQEQRTLNWKKGVTQPENLSLPTDDEPSKHFESPSGRDRMASWKKFPSPSGKSPKEADQLKDQSYGKVEPSKTSSSKRFTSDGDLSSAKPPELLPAKDSQDHASKHHHKVSWGYWGDQQNNSEESSIICRICEEEVATSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESCTQKDTQQIVGSPDVAKVSNSSMTEESDVVSPKLSDWSRRGSEDMLDCFPENDNTVFMDDLKGLPLMSCKTRFGPKSEQGMTTSSAGSMTPRSPLMTPRTSQIEMLLAGKGAYSEHDDMPQMNELADIARCVANTPLDDDRSTSYLLSCLDDLRVVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKVDMESTVMDDDVILEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPNMSTSEHQRELRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGIILFELLVGLPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPNQRLGARGASEVKEHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSEGLVYPASDAEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLLSKGWKDDPPANPGA 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151040g00042 1176 Gene3D Transferase(Phosphotransferase) domain 1 848 1071 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 1098 1121 - -
Stsc151040g00042 1176 Gene3D Phosphorylase Kinase; domain 1 844 1085 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 1 254 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 625 645 - -
Stsc151040g00042 1176 Gene3D Phosphorylase Kinase; domain 1 725 843 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 359 394 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 359 477 - -
Stsc151040g00042 1176 ProSiteProfiles Protein kinase domain profile. 782 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151040g00042 1176 Pfam Protein kinase domain 843 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 106 132 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 200 250 - -
Stsc151040g00042 1176 SMART serkin_6 782 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 12 29 - -
Stsc151040g00042 1176 SUPERFAMILY Protein kinase-like (PK-like) 779 1091 IPR011009 -
Stsc151040g00042 1176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 883 895 IPR008271 GO:0004672|GO:0006468
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 623 645 - -
Stsc151040g00042 1176 ProSiteProfiles AGC-kinase C-terminal domain profile. 1054 1158 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 921 951 - -
Stsc151040g00042 1176 CDD STKc_MAST_like 788 1058 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 395 411 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 438 455 - -
Stsc151040g00042 1176 PANTHER SERINE/THREONINE-PROTEIN KINASE 462 1148 - -
Stsc151040g00042 1176 MobiDBLite consensus disorder prediction 1103 1120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151040g00042 Stsc-Chr151040 290474 301245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151040g00042 1 1174 AGC Kinase Gene Family AT3G17850 58.050 0.0 1294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Stsc151040g00042 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151040g00042 - - gmx:100776995 1409.82