Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151040g00037 ATGAGCCGCGATCATCTTTCTGTGTTGGGAAGAACTTCTAAGGTAGAACTGCATGGTCTCCAGAGATCAGGCAGGTGCAGTGTTTGCTGCATCTACTTCTCATTCTACGCAATATTCTTTTCCTTCGTGGTATCCATAATCCTCTTTTGGATAATCATATCCCCATCAAGTGTCAAATTCCATGTAACCAATGTTTCCCTCACTCAGTTCAATCTCACCAACAACACCAACACATTGAACTACAAATTCAAAGTCAACATCACAGCAAGGAACCCTAACAACAAGGTCGTGGTGTACTACAGGGGAATCACTGCAATCTTGTGGTACAAAGACAGGTATTTGGTTAGTGTAAGATTGGCGCCATTTGATCAAGGTCACAAGAACACGAGCCTCCTTCAAGAAGCTGTGTTTGAAGGACAAAGCTCGATTCGACTCGGCCCAAAGCAAATTGCTGAGTACTACAATGAGAGGAGTTTGGGCATTTTCAATGACTTGGCTGTTGATTTGGATTTTAGGATAAGGGCTAAGTTTGGGAGGATTAAGAGCGTCCGATTCAATCCGCCGATTGTTCAGTGTCGCCGGCTTAGGGTTCCGTTGATTTCGAATGGTAAACCGGCGGCAACTTTTAATGTTACAAGGTGCAGCAGTAGTAATTTCTTTGCAGATCGTGATGCAGGAGATTAG 684 0.4386 MSRDHLSVLGRTSKVELHGLQRSGRCSVCCIYFSFYAIFFSFVVSIILFWIIISPSSVKFHVTNVSLTQFNLTNNTNTLNYKFKVNITARNPNNKVVVYYRGITAILWYKDRYLVSVRLAPFDQGHKNTSLLQEAVFEGQSSIRLGPKQIAEYYNERSLGIFNDLAVDLDFRIRAKFGRIKSVRFNPPIVQCRRLRVPLISNGKPAATFNVTRCSSSNFFADRDAGD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151040g00037 227 PANTHER OS05G0367900 PROTEIN 29 198 IPR044839 GO:0098542
Stsc151040g00037 227 Pfam Late embryogenesis abundant protein 86 185 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151040g00037 Stsc-Chr151040 252106 254206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151040g00037 52 199 SNARE and Associated Proteins AT1G32270 28.859 3.35e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151040g00037 - - gmx:100784278 240.35