Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151040g00004 ATGAGATGTACACTTTTTGGAGAGCTAGTAAAAGAAGTGGCACAACTGTTGCATAATGAGGATGCTGCGCCTTTGATTTTGGTGGCGCAGTTTTTTAAGCCAAGTGTATATCTGAATGAGGGTTATATTCAGAACATACCTCATGTTTCTCAGGTGTATATTAATCCAGATTATGAAGATGTTGCTACATTCAAAAGAAGTTTGCTCAGAGATAGAGAAGCTGCTTCTCAACGTATCACTCATGTGGAAAGTCAATCTCAATATTTTGCGGGTGATGAACTTTCTGGTGGTGATTACCGAATTGTTACATTTGAGGATGTCTTCAACATGACAGAGGAAACTCGGTGCTGGGTGTTAGCAGAGGTGGTTTCCATTGAAGCAGGTGCTGAAGATTGGTGTTATGCAACGTGTAACGACTGTAAAACTAAGTTGGAGCAGATTAAGAGTCATTATGTTTGTGATGACTGCGGGAGAGGCTTCAATAAACCACCTTTGAGGCTGTAA 504 0.4067 MRCTLFGELVKEVAQLLHNEDAAPLILVAQFFKPSVYLNEGYIQNIPHVSQVYINPDYEDVATFKRSLLRDREAASQRITHVESQSQYFAGDELSGGDYRIVTFEDVFNMTEETRCWVLAEVVSIEAGAEDWCYATCNDCKTKLEQIKSHYVCDDCGRGFNKPPLRL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151040g00004 167 SUPERFAMILY Nucleic acid-binding proteins 100 166 IPR012340 -
Stsc151040g00004 167 Gene3D - 85 167 IPR012340 -
Stsc151040g00004 167 Gene3D - 1 78 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151040g00004 Stsc-Chr151040 29167 29999 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc151040g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151040g00004 - K09228 ahf:112718168 172.94