Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00050 ATGTGCACTGTCGTGTTCATCACTTCTCTAGTGTGCTCTCAATCTCAACTTTACTATAATTTCTACGACTCGACTTGCCCGAACCTCACCAGAATCGTTCGGTACAACGTTTGGTCAGCTATGAACAATGACACAAGGATTGCAGCTTCTCTGTTGCGCCTTCATTTCCATGATTGCTTTGTCAACGGATGTGATGGATCTGTGCTGCTTGATTCAACGAGCACTTTTACTGGGGAGAAAAATGCACTGCCTAACAAGAATTCATTGAGAGGATTTGAGGTGATTGACACAATCAAATCAGCATTAGAGAAGGCATGTCCAGCCACTGTGTCATGTGCTGATATACTAACTCTAGCTGCAAGAGAGGCTGTTTATCTTAGTAAAGGGCCATTTTGGGTTGTCCCTCTTGGTCGTAGAGATGGCACGACAGCAAATGAGAGTGAGGCAAATAATCTGCCAGCACCCTTTGAATCACTTGAAAGCATTACCAACAAGTTCGTTGCCAAAGGTCTTGAATTGAAGGATGTAGCTGTGCTCCTAGGTGCACATACTTTTGGGTTTGCACAGTGCTTTACATTCAAGCCAAGGCTATTCAACTTTGGTGGATCTGGTAAAGCGGATCCAGCACTAGATGGTTCACTCCTGCAGAATCTACAAAGTCTATGTCCAAACCAAGCTAGCTCTGACACAAACTTGGCACCCTTGGATCATGTGACAAGCAACACATTCGACAACGTGTATTACAGAAACCTGTTGAACAATTCAGGGCTACTTCAATCAGACCAGGCTTTAATGGGAAACAACACCACTGCTTCATTGGTGAACACCTATAGCAAGTGGCCTCTTCTCTTCTTCAGAGACTTTGCTGTTTCTATGGAGAAAATGGGCCGCATTGGTGTCCTCACTGGACAACAGGGCCAAGTTAGGACTAATTGTAGGGCTCTCAACTAA 951 0.4458 MCTVVFITSLVCSQSQLYYNFYDSTCPNLTRIVRYNVWSAMNNDTRIAASLLRLHFHDCFVNGCDGSVLLDSTSTFTGEKNALPNKNSLRGFEVIDTIKSALEKACPATVSCADILTLAAREAVYLSKGPFWVVPLGRRDGTTANESEANNLPAPFESLESITNKFVAKGLELKDVAVLLGAHTFGFAQCFTFKPRLFNFGGSGKADPALDGSLLQNLQSLCPNQASSDTNLAPLDHVTSNTFDNVYYRNLLNNSGLLQSDQALMGNNTTASLVNTYSKWPLLFFRDFAVSMEKMGRIGVLTGQQGQVRTNCRALN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00050 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Stsc151039g00050 316 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PANTHER PEROXIDASE 72-RELATED 12 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 ProSitePatterns Peroxidases active site signature. 48 59 IPR019794 GO:0004601
Stsc151039g00050 316 FunFam Peroxidase 20 165 - -
Stsc151039g00050 316 SUPERFAMILY Heme-dependent peroxidases 16 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 26 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 ProSiteProfiles Plant heme peroxidase family profile. 16 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 FunFam Peroxidase 153 295 - -
Stsc151039g00050 316 Gene3D - 20 316 - -
Stsc151039g00050 316 CDD secretory_peroxidase 16 314 IPR033905 GO:0004601|GO:0042744
Stsc151039g00050 316 Pfam Peroxidase 34 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc151039g00050 316 Gene3D Peroxidase, domain 2 153 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00050 Stsc-Chr151039 272604 275406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00050 15 312 Peroxidase AT1G49570 64.452 2.37e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00050 K00430 - gmx:100815708 524.628