Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00049 ATGCGGTGGTTACCATCGAATATATTCAACCCTTCCCATCCTCATCATCATTCTCATTCTCATTCTCATTCTGCTGATGCTTCTTCTTCATCTTCTCCTCCTTCTTCCTCTGCGCCAAATGTTCCACCGCCTTCTTTGTCGCCCCCTCCATCCACTACCACTGCCCGCACGCTAAAGACATCCGCATCATCTGCCTCCCTAACGGACTTCCTCCACCCGAGAAAGAAAAGCACGCACGCCTCCTGGATCTTCGGAACCGTCGGGAAAAAGTCCTCCTCCAAGCACCTCAAGGTATCACACCACGCCGCCGATGACCTAGATGATGATTCCGACGCCGTTGTTCCTATGGCTCGTTCCGATCGCACCTATACACGCTCCTACACCATATGTTCCCCTGCCTCCGCCTTTGTTGCTCCTCAGCCCTTGCCCATGCCCCATCAGGACCTCTCCTTCCACCGCCATCTCACCGTTGACCGCCCTCTTCCATCCCCAAAGATGGACATTGCCAGTAAGCAATCTTTCTTCTCATCCTCCAGAGGCTTAGACGAACGCGAACTCAAACTCGACGCCCTCGTCGTCGATCCTGTCCCCAATGCCTATCCTCGCATGCGCAGTGTATTTGCTAGCGCAAAAAAGAACAATGATGCGATGGAAAGAAGAGTGCCAGGTTTAGGGCCTCAAGAAAACGGTGGTTATGGAGGAGGAGATAACAGCCTGAGGATGGGCTTGTCAACGTCAAGGAGTGCTCCATGTAGCCCATTTGAAAGCCCAGCATTAAGCCCACAGAACATGAGAAACGATGACTTTGTGCCGTACCATTACACGCCACCAAAACAGATCAACCATTTCTGGTCTGCACCAGATATCATGGCTACATCATCATCTTCTGATCACTTCGGAGGAGCTGGTTTATTTGATTTCTCTCCAATGGGGATTGATGCTACTACCAATAATTCTCCACACCACAGTCCCACGGGAATCTTGACCCCACGCCATGGCAACTCCAGAAGCCCAACAAGGCCTTCTTCACCCATACAGGGGAGCAGCAGCAGGTTGTCCCTTGACAACTTCAAACCACAAGCTCGCCGTGATGTTATTCTTGGTCCTATCAACAGCAATGTCCATCCCTTACCCTTGCCTCCTCCCTCCTCCGCCTTGACTTCACCAACTGCTGCTTATGCACAGTCCCAACAAGGTGGCAGAAATGAATCCTGCTCAATGCAAAGCCAATGGCAAAAGGGGAAGCTCATCGGTCGAGGTACTTTCGGAAGCGTCTATGTTGCTACCAATAGAGAAACCGGAGCGTTGTGCGCAATGAAAGAAGTAGAAATATTTGCTGATGATCCAAAATCTAAAGAGTGTATAAAACAGTTAGAGCAGGAAATTAAAATTCTTAGTCATCTGAAGCATCCAAACATTGTGCAATATTATGGTAGTGAAATAGTTGGAGACAAGTTTTACATTTATCTGGAATATGTCCATCCAGGTTCAATAAACAAATACGTACGGGAACATTGCGGTGCAGTAACGGAATCTGTTGTTAGGAACTTCACTCGCCACATTCTTTCAGGGCTAGCTTACTTGCATAGCACGAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGTTAGTTGATTCTACTGGAGTTGTCAAGCTAGCTGACTTTGGGATGTCTAAACATCTAACGGGTCATGCTGCTGATCTTTCTTTGAAGGGAAGCCCATATTGGATGGCGCCAGAGCTTATGCATGCAGTGATGCAAAGAGATAACAACTCTGATCTAGCTTTAGCTGTTGATATTTGGAGTTTGGGTTGCACAATCATCGAAATGTTCACAGGGAAGCCTCCTTGGAGCGAATACGAAGGAGCAGCAGCTATGTTTAAGGTTATGAGGGATACACCTCCTATACCTGAACAATTGTCATCAGAGGGAAAAGATTTCCTGAGACATTGCTTCAGAAGAAATCCAGCAGAAAGACCAAATGCATTGATGTTGCTAGATCACCGATTTGTGAAGCACTTCTAA 2028 0.4763 MRWLPSNIFNPSHPHHHSHSHSHSADASSSSSPPSSSAPNVPPPSLSPPPSTTTARTLKTSASSASLTDFLHPRKKSTHASWIFGTVGKKSSSKHLKVSHHAADDLDDDSDAVVPMARSDRTYTRSYTICSPASAFVAPQPLPMPHQDLSFHRHLTVDRPLPSPKMDIASKQSFFSSSRGLDERELKLDALVVDPVPNAYPRMRSVFASAKKNNDAMERRVPGLGPQENGGYGGGDNSLRMGLSTSRSAPCSPFESPALSPQNMRNDDFVPYHYTPPKQINHFWSAPDIMATSSSSDHFGGAGLFDFSPMGIDATTNNSPHHSPTGILTPRHGNSRSPTRPSSPIQGSSSRLSLDNFKPQARRDVILGPINSNVHPLPLPPPSSALTSPTAAYAQSQQGGRNESCSMQSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFADDPKSKECIKQLEQEIKILSHLKHPNIVQYYGSEIVGDKFYIYLEYVHPGSINKYVREHCGAVTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSTGVVKLADFGMSKHLTGHAADLSLKGSPYWMAPELMHAVMQRDNNSDLALAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMRDTPPIPEQLSSEGKDFLRHCFRRNPAERPNALMLLDHRFVKHF 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00049 675 MobiDBLite consensus disorder prediction 51 71 - -
Stsc151039g00049 675 Pfam Protein kinase domain 412 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151039g00049 675 MobiDBLite consensus disorder prediction 218 238 - -
Stsc151039g00049 675 MobiDBLite consensus disorder prediction 1 71 - -
Stsc151039g00049 675 SUPERFAMILY Protein kinase-like (PK-like) 407 673 IPR011009 -
Stsc151039g00049 675 FunFam Mitogen-activated protein kinase kinase kinase 5 408 675 - -
Stsc151039g00049 675 Gene3D Transferase(Phosphotransferase) domain 1 407 675 - -
Stsc151039g00049 675 MobiDBLite consensus disorder prediction 315 358 - -
Stsc151039g00049 675 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 22 674 - -
Stsc151039g00049 675 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Stsc151039g00049 675 MobiDBLite consensus disorder prediction 315 356 - -
Stsc151039g00049 675 ProSiteProfiles Protein kinase domain profile. 411 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151039g00049 675 SMART serkin_6 411 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151039g00049 675 MobiDBLite consensus disorder prediction 244 263 - -
Stsc151039g00049 675 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00049 Stsc-Chr151039 267309 270192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00049 34 674 MAP Kinase Kinase Kinase AT5G66850 49.924 1.77e-178 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Stsc151039g00049 Pkinase 3.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00049 - - psat:127120353 629.017