Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00043 ATGGAGGTGAGCTTGGATTTGGATTTGAGTTTGTCGTTTGTCCCAAAGAGCATATCAATGTTCCTAGGTGATGTTTCTGGGAGCACAAAAGCCTCTGACAAATTGGCCATGCTTGATGACTTCCTCAACCGATTGGAGGAAGAGATGACCAAGATTCATGCCTTCAAACGTGAGCTTCCCCTTTGCATGCTCCTTGTCTCCGATGCTATAACAAGGTTGAAGGAGGAAAAGGTTCGCTGTATGGCAAAGCAAGATCCACAACCTCTCACCAGTCAAGAAGCAGATAATGATAATGGAGCCTTGAATAAGAAAAACTGGATGACTTCACTTCAGTTGTGGAGCACTCAAACCAAATCGAGGTGTGAAGAAGATTGTTCTGTGCCAGAGAACCCAATTAAGAGAAGGGAGAACAAGAGCAGAAGTGGAGGAGGAGGAGGAAGAGATGCATTGTTGAATGGGAACTCAAAGGAGGTTTCTAAAGTTCCTACCTTTACTTTGATGACTGCTACTCCAACCCCTGAACTGAAAAGTAGCAATTCCAAGACTAGTTCTTCTTCTCTGCTCATGAGCCGTGTTGAGATTCAACCCCAACAACCTCAGAATCCTAGGAAACAAAGGCGATGCTGGTCTCCGGAGCTTCACCGGCGTTTCGTCAATGCACTCCAACAACTTGGGGGAGCACAAGTGGCCACTCCTAAGCAGATAAGGGAACTGATGCAGGTAGAAGACCTAACAAATGATGAAGTCAAAAGTCATTTACAAAAGTACAGACTTCATGTTAGGAGATTCCCAGTTTCATCCTCAGGTGAGACTCATCATGGTAATAATACTAATGATGATGATGATGAGGATGGTGAATGTGGAAAAGGGAAGAATAATTCATCATCATCACAATCAAAATCTGGTTCACCAAATGGTCCATTACTATTAGCAGGTTCTGTGAAGGGACTCTCAAGCATGGATGCAGATGATGAGCACTCAGATTGCCGCAATTGGAAAGCTGCCATTCACCAACAACCACCACAATCTCATAATCACAGCCGCTAA 1047 0.4422 MEVSLDLDLSLSFVPKSISMFLGDVSGSTKASDKLAMLDDFLNRLEEEMTKIHAFKRELPLCMLLVSDAITRLKEEKVRCMAKQDPQPLTSQEADNDNGALNKKNWMTSLQLWSTQTKSRCEEDCSVPENPIKRRENKSRSGGGGGRDALLNGNSKEVSKVPTFTLMTATPTPELKSSNSKTSSSSLLMSRVEIQPQQPQNPRKQRRCWSPELHRRFVNALQQLGGAQVATPKQIRELMQVEDLTNDEVKSHLQKYRLHVRRFPVSSSGETHHGNNTNDDDDEDGECGKGKNNSSSSQSKSGSPNGPLLLAGSVKGLSSMDADDEHSDCRNWKAAIHQQPPQSHNHSR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00043 348 MobiDBLite consensus disorder prediction 290 306 - -
Stsc151039g00043 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 261 IPR017930 -
Stsc151039g00043 348 MobiDBLite consensus disorder prediction 264 348 - -
Stsc151039g00043 348 MobiDBLite consensus disorder prediction 123 187 - -
Stsc151039g00043 348 SUPERFAMILY Homeodomain-like 202 262 IPR009057 -
Stsc151039g00043 348 Pfam Myb-like DNA-binding domain 206 257 IPR001005 -
Stsc151039g00043 348 MobiDBLite consensus disorder prediction 274 289 - -
Stsc151039g00043 348 NCBIfam myb-like DNA-binding domain, SHAQKYF class 204 259 IPR006447 GO:0003677
Stsc151039g00043 348 MobiDBLite consensus disorder prediction 156 187 - -
Stsc151039g00043 348 Gene3D - 203 260 - -
Stsc151039g00043 348 MobiDBLite consensus disorder prediction 123 142 - -
Stsc151039g00043 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 330 IPR044787 GO:0003700|GO:0006355
Stsc151039g00043 348 FunFam Myb family transcription factor 203 261 - -
Stsc151039g00043 348 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00043 Stsc-Chr151039 229668 231763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00043 8 273 G2-like Transcription Factor Family AT2G03500 40.645 3.66e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc151039g00043 Myb_DNA-binding 8.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00043 - - gmx:100785723 325.865