Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00038 ATGGATCGAACGCCGGCAGCGGCGGTGGGAGCTGGCGGAGGAGCAGGGATGGAGTTGCCAATCATGCACGAAAGTGACCGCTACGATTTCGTCCGTGACATCGGCTCCGGGAATTTCGGCGTGGCGAGGCTCATGAGGGATAAGGTCACCAAGGAGCTTGTTGCTGTTAAGTACATCGAACGCGGTGATAAGATTGATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTAAGACATCCTAACATCATCAGGTTTAAAGAGGTCATTTTGACACCTACTCATCTGGCCATCGTAATGGAATATGCATCTGGAGGAGAATTGTTCGAGCGAATCTGCAAAGCAGGGCGTTTTACTGAAGACGAGGCTCGGTTCTTCTTTCAACAACTCATATCTGGAGTCAGCTATTGCCATGCAATGCAAGTATGTCATCGGGACTTGAAGTTGGAGAACACTTTGTTGGATGGAACTTCAGCCCTTCAGTTGAAGATATGTGATTTTGGGTACTCCAAGTCTTCAGTGCTCCATTCACAACCAAAGTCAACAGTGGGCACTCCAGCATATATTGCTCCAGAAGTATTGCTAAAGCAAGAGTATGATGGCAAGGTTGCGGATGTTTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGAACCTAAAGACTTCAGGAAGACAATTCAGAGGGTCCTCAGCGTGCAGTACTCCATCCCAGACTTCGTTCAAGTATCTCCAGAGTGTCGCCACCTTATATCAAGGATCTTTGTTTTTGACCCTGCCGAGAGGATCACAATTCCTGAAATCTTGAAAAACGAATGGTTCTTGAAGAATCTTCCAGCGGAGTTGATTGGTGAAAAAATTATGAGTAATCAATTTGAAGAGCCGGATCAACCCATGCAGAGCATTGATGAGATCATGCAGATAATTTCAGAAGCTACGATTCCACCAGCTGGGGCACATACGTTAGACCAGTTTATGATGGATAACATCGATGTGGATGATGACATGGATGACTTGGACTCTGACTTTGAGCTTGATGTAGATAGCAGTGGGGAGATAGTGTATGCTATATAA 1104 0.4502 MDRTPAAAVGAGGGAGMELPIMHESDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICKAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGTSALQLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKVADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRVLSVQYSIPDFVQVSPECRHLISRIFVFDPAERITIPEILKNEWFLKNLPAELIGEKIMSNQFEEPDQPMQSIDEIMQIISEATIPPAGAHTLDQFMMDNIDVDDDMDDLDSDFELDVDSSGEIVYAI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00038 367 PANTHER SERINE/THREONINE KINASE 27 296 - -
Stsc151039g00038 367 SMART serkin_6 28 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151039g00038 367 FunFam Serine/threonine-protein kinase SRK2E 21 103 - -
Stsc151039g00038 367 Gene3D Transferase(Phosphotransferase) domain 1 104 292 - -
Stsc151039g00038 367 Pfam Protein kinase domain 28 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151039g00038 367 ProSiteProfiles Protein kinase domain profile. 28 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151039g00038 367 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Stsc151039g00038 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Stsc151039g00038 367 Gene3D Phosphorylase Kinase; domain 1 9 103 - -
Stsc151039g00038 367 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Stsc151039g00038 367 FunFam Serine/threonine-protein kinase SRK2E 104 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00038 Stsc-Chr151039 202617 206730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00038 27 288 CBL-interacting serine-threonine protein kinases AT5G25110 44.526 1.32e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Stsc151039g00038 Pkinase 3.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00038 K14498 - gmx:100783967 612.068