Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00027 ATGGAGGATCTGCTTCAATCTTTGTCAACCTCAGTAGTTTACATACTTGCTTTGCTGATCTGCATCTTCATTTATTATGTTGGAAGATCAGTTACTAGTAACAAAATCAAGACCTGTACCGCGCCACAAGCAGGCGGGGCGTTGCCAATTATCGGCCATCTACACCTATTTGGTGGAAAGAAACTCCTCTTTGAAACACTTTGTACCTTGGCAGAAAAATATGGACCAGCCTTTACCATAAAGATGGGTTCAAACAAGGTCCTAGTCTTGAGTAGTTGGGAAATGGCCAAAGAGTGTTTCACTGAACATGATAAAGCATTCGCAGACAGACCTCTAGTTACTGCTTCAAAACTACTAGGATATGATGGTGCAATGTTTGGTTTTGCACCTTACAGTCCTTACTGGCGTGAGATGCGCAAGATTGTCACAATCCACCTTCTATCGAACCATAGGATTGATCTGCTTAAGCACATACGAGCTTCAGAGGTGGAGATGGCAATGAGAGAGCTGTATGGCTTATGGTCAAGCAAAGGCTGCCCGGAGAATGGAATATCAGTCGAAATGAAGCAATGGTTTAGTGATGTGGCATTTAACATTATATTGAGAATGATATCATGTAAGAGATACTTTGGAGTGAGTTCAGATGATGGTAAGGCACAAAATTTCCAGAAAATAATAAGGGACTTCATGAACCTATTTGGGGTGCCTGTGTTGTCTGATTCAATCCCAGCTCTTTGGTGGTGGGATATACATGGTTACAAGAAGAAGATGAAGAAGACAGCTCAAAAACTTGACCAACTACTTGGGGAGTGGCTAGAGGAACACAAGCAGAGAAGACTATTAGGCAAGGATGCAGAGGAAGAGCTAGATTTCATGGATGTGATGCTGAGAGTCCTAGAAGAAAACCCGATTTCTTATTTTGACACAGATACCATTATCAAGTCTACTCTCCTGAATCTGTTAGCAGGAAGTGACTCAATTATGGTAGCTATAACATGGACCTTGTGTCTGTTACTTAATAATCCACATGTACTGAAGAAGGCTCAAGATGAGTTGGACAACAAGACTGGGAGGAATAGACAAGTGAAAGAATCTGACATCAAGGATTTGGTGTATCTTCAAGCCATTGTGAAGGAATCATTGCGGGTAAGCTCTCCAAGTGGGGTCATTTTTCCTCGTGCGGCGATGAAGGATTGCACACTTTCAAATGGCTACCATGTACCAGCAGGCACCAAGGTGATGATTAACATATGGAAAATAATGCATGATGAGCAATTGTGGCCTGATCCATATAGCTTTGAACCTGAGAGATTCTTGTGCAGCAGCCACAAGGACATGGATGTTAGGGGCCAACACTTTGAGCTTCTCCCATTTGGCTCCGGAAGGCGTTCGTGCCCCGGAATTTCACTAGCTCTCAGTGTTATGCATCTTATTCTGGCTGCACTGCTGCATAGCTTTGAAATTACTACTCCATCCAATGAACCTGTGGACATGACAAAGGGCATTGGTTTGACAAATGTGAAAGCAACCCCACTTGAGGTTCTTCTTGTTCCACGCCTCAACTGTGTTTTGTGA 1575 0.4305 MEDLLQSLSTSVVYILALLICIFIYYVGRSVTSNKIKTCTAPQAGGALPIIGHLHLFGGKKLLFETLCTLAEKYGPAFTIKMGSNKVLVLSSWEMAKECFTEHDKAFADRPLVTASKLLGYDGAMFGFAPYSPYWREMRKIVTIHLLSNHRIDLLKHIRASEVEMAMRELYGLWSSKGCPENGISVEMKQWFSDVAFNIILRMISCKRYFGVSSDDGKAQNFQKIIRDFMNLFGVPVLSDSIPALWWWDIHGYKKKMKKTAQKLDQLLGEWLEEHKQRRLLGKDAEEELDFMDVMLRVLEENPISYFDTDTIIKSTLLNLLAGSDSIMVAITWTLCLLLNNPHVLKKAQDELDNKTGRNRQVKESDIKDLVYLQAIVKESLRVSSPSGVIFPRAAMKDCTLSNGYHVPAGTKVMINIWKIMHDEQLWPDPYSFEPERFLCSSHKDMDVRGQHFELLPFGSGRRSCPGISLALSVMHLILAALLHSFEITTPSNEPVDMTKGIGLTNVKATPLEVLLVPRLNCVL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00027 524 Coils Coil 250 270 - -
Stsc151039g00027 524 PANTHER CYTOCHROME P450 82C3-RELATED 17 521 - -
Stsc151039g00027 524 Gene3D Cytochrome P450 35 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 SUPERFAMILY Cytochrome P450 48 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 Pfam Cytochrome P450 42 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00027 524 FunFam Cytochrome P450 82C4 31 517 - -
Stsc151039g00027 524 Coils Coil 345 365 - -
Stsc151039g00027 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Stsc151039g00027 524 CDD CYP82 75 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00027 Stsc-Chr151039 152364 154366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00027 15 520 Cytochrome P450 AT4G31940 49.031 3.50e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00027 - - qsu:112038068 665.996