Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00026 ATGGATACTCTGGTTAAAGGGTGGCTTGATGAACACAAAAGGAAAAGAGCTTCCAATAAGGAAGAGCAGGATTTCATGGATGTCATGCTTAATTCTCTGCAGAATGCTCATGTATTTGGTTATAGTGCTGATACCATCATCAAGGCTACTTGTTTGAATCTGATACTAGCAGGAAGCGATGCCATCATGGTTACTCTAACATGGGCGCTATCTCTGCTACTCAACAACAAAATAGAACTCAAAAGGGTGCAAGAAGAGATCAACATTCACATCGGAAACGAGAGGAAGGTAGAAGAATCAGACATAAGCAAGTTAGTGTACTTGCAAGCAGTAGTGAAAGAAACTCTAAGACTATATCCACCAAGTCCCATCATAACGTTTCGTGCAGCCATGGAAGACTGCACTTTCTCATGCGGATATCACATCCCTGCAGGCACACACCTAATGGTGAATGCATGGAAGATCCACAGGGATGGTCGTGTATGGGAAGATCCACAAGATTTCAAGCCCGAAAGGTTCTTGACAACACACAAGCATGTAGATGTGAGAGGTCAGAACTTTGAGCTTGTGCCTTTCAGTTCTGGAAGGAGGGCTTGCCCTGGTGCCTCCCTGGCTTTGCGTGTTGTGCATTTAACGTTGGCTAGGTTGTTACAATCTTTTGAAATTGAATCTCCTTCAGATGAAGCTCTAGACATGACAGAGAGCTTTGGCCTCACCAATTTGAAAGCCACCCCACTTCAAGTTCTCCTAACACCACGTCTACAACCCAAGCTTTATGAGCACTAG 786 0.4427 MDTLVKGWLDEHKRKRASNKEEQDFMDVMLNSLQNAHVFGYSADTIIKATCLNLILAGSDAIMVTLTWALSLLLNNKIELKRVQEEINIHIGNERKVEESDISKLVYLQAVVKETLRLYPPSPIITFRAAMEDCTFSCGYHIPAGTHLMVNAWKIHRDGRVWEDPQDFKPERFLTTHKHVDVRGQNFELVPFSSGRRACPGASLALRVVHLTLARLLQSFEIESPSDEALDMTESFGLTNLKATPLQVLLTPRLQPKLYEH 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00026 261 PRINTS E-class P450 group I signature 199 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 PRINTS E-class P450 group I signature 46 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 PRINTS E-class P450 group I signature 189 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 PRINTS E-class P450 group I signature 66 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 PRINTS E-class P450 group I signature 151 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 PRINTS E-class P450 group I signature 109 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 192 201 IPR017972 GO:0005506|GO:0016705
Stsc151039g00026 261 PANTHER CYTOCHROME P450 82C3-RELATED 1 259 - -
Stsc151039g00026 261 FunFam Uncharacterized protein 1 255 - -
Stsc151039g00026 261 PRINTS P450 superfamily signature 199 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 PRINTS P450 superfamily signature 110 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 PRINTS P450 superfamily signature 57 74 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 PRINTS P450 superfamily signature 190 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 Gene3D Cytochrome P450 1 256 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 Pfam Cytochrome P450 8 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00026 261 SUPERFAMILY Cytochrome P450 2 253 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00026 Stsc-Chr151039 148734 150558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00026 1 259 Cytochrome P450 AT4G31950 53.962 4.46e-99 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00026 - - gmx:100777753 419.083