Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00009 ATGGAAGTACTTGCTAGTTCTGGTGTTCAATGTAGTGGTGAATCTGATCATCCTCAGCAGAGTCCAGGAACAGCTTTGATATACCAGGGAGAACCTAATTGCCCTGAAAATGGTCAACAAGTTAAACTGGCAGATGGTCAACTGAATGAATTATCACACAAAATGGAAGGGTCTCAGATAGAAAAGCAGGGTGAAGAGAAAAGGACTGTCTGTCATTTGTCGACTAAATCAGATGTTCAATGCAGCAGGGATTCAGGTTGTGACTCTCAGGGGGAAGACCAGAAGGAAGACTCTGCTCTTGATGATCTTGATGATGATTCCATAAATGAACCTTGCTTAACCTCTGAAAACTCTCTCTTGGTTGTGGATACAATTGAAGGTGAATCACCAAACAACAGGGATGGAGATTTGTCATTTTCGGAACCCAAGTGGTTAGAGGGGGATGAACCTGTGGCATTATGGGTCAAGTGGAGGGGGAAGTGGCAGACTGGCATCAGATGTATGAGAGCTGACCGGCCATTATCAACTTTGAGAGCAAAACCAACTCATGGGCGGAAGAAATATTTTGTCATTTTTTTCCCACACACAAGGAATTATTCTTGGGCAGATATGCTGCTTGTCCGATCAATTGATGAATTTCCCCATCCTATTGCATATAGGACTCATTGGGTAGGATTAAAAATGGTAAATGACTTGACTATTGCACGCCGGTTTATAATGCAGAAGCTAGCTATTGGAATGCTGAATATTGTTGATCAGCTTCATCCAAATGCACTGACAGAAACTGCCCGTGATGTGAAGGGATGGAAGGAATTTGCCATGGGTACTTCCCATTGTAGTGGTTATTCAGAATTTGGAAGAATGCTTCTAAAACTGCACAATAGCATATTGCAGAACTACATAAATGCTGATTGGTTACAGCATTCTTCTCACTCTTGGGTTGAACGATGTCATATTGTGAACAGTGCCGAATCCGCAGAGCTGCTGAAGGAGGAATTGTCTGATTCTATTTTGTGGAATGATGTCAACTCTCTGTGGACGACACCAGCACAACCAACATTAGGTTCGGAATGGAAATCCTGGAAGCATGATGTAATGAAATGGTTTACGACATCACCTTCCTTATCTTGCAGCAAAGACACACAGCCACAGGCTTCTGATGCTTCATATGCTGCAAATTTTCAAGTTTCTAGAAAACGACCCAAACTTGAAGTTCGTCGGGCAGATACACATGCTTCTCCAGTGGAAAGAAAAGATGCAAATCACTCTATTGCTCTTGAGACTGACCTTGGGTTCTTTAAGAATCAGGATACATCGAGCCTATTAGCCGCTGAGAATGGTAAACATGAAGATGCTAGGGAGGTATCTGCTGCGAACAATTTACCTAGTAATGTTTCCAATAAATGGAATGAAATTGTAGTTGAGGCTGCCGATTCGGATTGCTTGCCTAAAGGAATGGAATTAACACCTGTGAGTGAAATGGCTGTTTCAACATTGGTAGAGCCTGGTAGTAAGAATCGACAATGTATAGCTTACATTGAAGCTAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTTTACTGTTGTGTGCATTTGTCCTCTCGATTTTTGGGCAGCTCTGAAAAAACTGATAAGCTGGTTCCAGTTGATACTCCTATGTGTGAAGGTACTACTGTTCTCGGTACAAAATGTAAGCACCGTGCCCTACCTGGTTTTCTATTCTGTAAGAAACACAGGCCTCATGCTGAAACAGAACGGATCTCACATTTACCACAAAGTACCCTGAAAAGGAAACACGACGAGAATTATGCTGGTTCAGAGAACACCTGCAGAGACATTGTATTGGTAAATTCTGAAAGCCCACTAGAAGTGGAGCCAGTGTCATTCATTGGCGGTGACTACTTGCATGGAAAAAGCAACTTCAGTGAGACTCCCAAGCATCCTGATAATAATTATGATGCAATGAAGGGTCAGCATTGTATTGGTTCTCCTCCCTTTGATGACAAGAATCCTTGTAGAGAAGCTCCTAAGCGATATTGCTTGTATTGTGAAAATCACCTTCCTAGCTGGCTTAAACGTGCAAGAAATGGAAAGAGTAGAATCATATCGAAAGAAGTGTTCACAGAACTCTTGAGGGACTGCAGCTCATGGGAGCAAAAAGTGCATTTGCATAAAGCTTGTGAGCTTTTCTACAGGCTGTTCAAAAGCATTTTATCACTAAGAAACCCAGTTCCTAAGGATGTTCAATTCCAATGGGCTTTGACCGAAGCCTCTAAAGATATTAGTGTAGGAGAATTCTTTACAAAGCTGGTTCATAGTGAGAAGGCTAGAATCAAACTAATTTGGGGATTCAGTGATGACTTGGATGTACCTCCTCCTATCATGGAAGAACCACCACTTTTGCCATCCACAACTAATGATAGCATTGATAATGAAAATGCCATTAAGTGTAAGATATGCTCTGCTGAATTCGGTGATGATCAAGCTCTTGGTAACCACTGGATGGATAGTCATAAAAAGGAAGCACAGTGGCTGTTTAGGGGTCATGCATGTGCCATTTGTCTGGATTCTTTTACTAACAGGAAACTATTGGAAACCCATGTTCAAGAGCGACACCATGTGCAGTTTGTTGAACAGTGTATGCTTCTACAATGTATTCCTTGTGGTAGTCATTTTGGAAACAGTGAGCAATTATGGCAGCATGTCTTATCAGTTCATCCTGTTGATTTAAAGCCGTCGAAAGTTCCTGAGAAGCAAACTCTCCCTACTGGGGCTGGTCAAGATTCTCCAGTAAAACATGACCAGGAAAACTTGGCTCCTTTGGAGAATAACTCTGAGAATCCAGGTGTCTCGCGGAAGTTCACTTGCAGGTTTTGTGGTTTGAAATTTGATTTGCTACCTGACCTTGGTCGACATCACCAAGCTGCCCATATGGGGCCCAATCTAGTTAGCAACAACAACCACCCTGCAAAGAAGGGAGTTCGCTACTATGCATATAGATTAAAGTCTGGTAGACTTAGCCGTCCTAAATTTAAAAAAGGTTTGGCAGCAGCATCATATAGAATCAGAAATAGGGCTAATGCTAATCTAAAGAGAGGCATTCAAGCAACAAAATCACTTGGCATGAGGGAAACTTCCTTACAACCTCGTGTAACATCATTACAACCTCATGTGACAACATCTTTACAACCTCGTGTAACTGAAACATCAAAGATTAGTAAATTCACTGAACATCAGTGCTCAGCAGTTGCAAAAATTTTATTTTCTGAGATTCAGAAGACTAAACCTCGGCCCAACAATCTTGATATTCTATCAATTGCTCGCAGTGCTTGCTGCAAAGTTAGTCTTGCAGCCTCACTCGAGGAGAAATATGGAATTCTACCCAAAAGAATATATTTGAAGGCAGCAAAACTTTGTGCTGAGCATAATATTATTGTAAATTGGCACCATGAGGGGTTTATTTGTCCTAGAGGCTGCAAGGATTTGAAGGATCAAGCATTGCTCTCTCCCTTATCATCTCTTCCTAATAGTATTGTAAGGCCAAAATCTGTAAATTTATCAGATCATGCAAGTGATGAGTGGGAACTGGATGAATTTCATTGCATCATCAATTCACATGGTTTAAAGTTAGGGCCACTACAAAAATCTACCATCTTGTGTGATGATATAAGCTTTGGGAAGGAATCATCTCCTGTGATTTGTGTAGTAGATCAAGAACTTCTGCATTCTATCAATATGAATGGGTCCAATGATCAAGATACTGACTCTTCTATGCCTTGGAAGAGCTTTACCTATGTTACAAAGCCAATGCTTGATCAATCCCTTAGTCTTGATTCAGAGAGTCTGCAATTGGGATGTTCCTGCTCATATTCTTCCTGCTGTCCTGAAACATGTGACCATGTATACCTTTTTGGTAATGACTATGATGATGCAAACGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGACGAGAATGGTCGAATAATATTAGAGGAAGGTTACCTTGTCTATGAGTGTAACCAAATGTGCAGATGCAATAAGTCCTGTCCAAACAGAATATTGCAGAATGGAGTACGAGTCAAGTTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGGTGTAAGGGCTGGGGAGGCTATTCTACGCGGCACATTTGTGTGCGAGTACATTGGAGAGATTTTAGATGTTCAGGAGGCACACAACAGGCGCAAGAGATATGGCACAGGCAATTGCAGTTATTTCTATGACATCGATGATCATGTTAACGATATGAGCAGATTGATTGAAGGGCAGGCCCAATTTGTGATAGATGCTACTAAATATGGAAATGTGTCTAGGTTCATCAATCATAGCTGCTCCCCAAATCTTGTGAATCACCAAGTTCTAGTGGAGAGCATGGATTGCGAGCGTGCACACATCGGTCTTTATGCGAGTCGAGATATTCCTCTGGGGGAAGAGCTGACACATGACTATCATTATAAGCTTGTGGATGGAGAAGGATCACCATGCCTTTGCGGCGCTTCCAAGTGCAGGGGACGCCTTTACTAG 4566 0.4185 MEVLASSGVQCSGESDHPQQSPGTALIYQGEPNCPENGQQVKLADGQLNELSHKMEGSQIEKQGEEKRTVCHLSTKSDVQCSRDSGCDSQGEDQKEDSALDDLDDDSINEPCLTSENSLLVVDTIEGESPNNRDGDLSFSEPKWLEGDEPVALWVKWRGKWQTGIRCMRADRPLSTLRAKPTHGRKKYFVIFFPHTRNYSWADMLLVRSIDEFPHPIAYRTHWVGLKMVNDLTIARRFIMQKLAIGMLNIVDQLHPNALTETARDVKGWKEFAMGTSHCSGYSEFGRMLLKLHNSILQNYINADWLQHSSHSWVERCHIVNSAESAELLKEELSDSILWNDVNSLWTTPAQPTLGSEWKSWKHDVMKWFTTSPSLSCSKDTQPQASDASYAANFQVSRKRPKLEVRRADTHASPVERKDANHSIALETDLGFFKNQDTSSLLAAENGKHEDAREVSAANNLPSNVSNKWNEIVVEAADSDCLPKGMELTPVSEMAVSTLVEPGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSEKTDKLVPVDTPMCEGTTVLGTKCKHRALPGFLFCKKHRPHAETERISHLPQSTLKRKHDENYAGSENTCRDIVLVNSESPLEVEPVSFIGGDYLHGKSNFSETPKHPDNNYDAMKGQHCIGSPPFDDKNPCREAPKRYCLYCENHLPSWLKRARNGKSRIISKEVFTELLRDCSSWEQKVHLHKACELFYRLFKSILSLRNPVPKDVQFQWALTEASKDISVGEFFTKLVHSEKARIKLIWGFSDDLDVPPPIMEEPPLLPSTTNDSIDNENAIKCKICSAEFGDDQALGNHWMDSHKKEAQWLFRGHACAICLDSFTNRKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNSEQLWQHVLSVHPVDLKPSKVPEKQTLPTGAGQDSPVKHDQENLAPLENNSENPGVSRKFTCRFCGLKFDLLPDLGRHHQAAHMGPNLVSNNNHPAKKGVRYYAYRLKSGRLSRPKFKKGLAAASYRIRNRANANLKRGIQATKSLGMRETSLQPRVTSLQPHVTTSLQPRVTETSKISKFTEHQCSAVAKILFSEIQKTKPRPNNLDILSIARSACCKVSLAASLEEKYGILPKRIYLKAAKLCAEHNIIVNWHHEGFICPRGCKDLKDQALLSPLSSLPNSIVRPKSVNLSDHASDEWELDEFHCIINSHGLKLGPLQKSTILCDDISFGKESSPVICVVDQELLHSINMNGSNDQDTDSSMPWKSFTYVTKPMLDQSLSLDSESLQLGCSCSYSSCCPETCDHVYLFGNDYDDANDIFGKPMRGRFPYDENGRIILEEGYLVYECNQMCRCNKSCPNRILQNGVRVKLEVFKTEKKGWGVRAGEAILRGTFVCEYIGEILDVQEAHNRRKRYGTGNCSYFYDIDDHVNDMSRLIEGQAQFVIDATKYGNVSRFINHSCSPNLVNHQVLVESMDCERAHIGLYASRDIPLGEELTHDYHYKLVDGEGSPCLCGASKCRGRLY 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00009 1521 SUPERFAMILY SET domain 1215 1511 IPR046341 -
Stsc151039g00009 1521 ProSiteProfiles Post-SET domain profile. 1505 1521 IPR003616 -
Stsc151039g00009 1521 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1521 - -
Stsc151039g00009 1521 MobiDBLite consensus disorder prediction 1 39 - -
Stsc151039g00009 1521 Pfam SET domain 1377 1497 IPR001214 GO:0005515
Stsc151039g00009 1521 ProSitePatterns Zinc finger C2H2 type domain signature. 959 980 IPR013087 -
Stsc151039g00009 1521 Coils Coil 48 68 - -
Stsc151039g00009 1521 SMART c2h2final6 886 909 IPR013087 -
Stsc151039g00009 1521 SMART c2h2final6 957 980 IPR013087 -
Stsc151039g00009 1521 SMART c2h2final6 852 875 IPR013087 -
Stsc151039g00009 1521 SMART c2h2final6 818 841 IPR013087 -
Stsc151039g00009 1521 ProSitePatterns Zinc finger C2H2 type domain signature. 888 909 IPR013087 -
Stsc151039g00009 1521 ProSitePatterns Zinc finger C2H2 type domain signature. 820 841 IPR013087 -
Stsc151039g00009 1521 Pfam Pre-SET motif 1227 1358 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc151039g00009 1521 Gene3D Classic Zinc Finger 805 878 - -
Stsc151039g00009 1521 ProSiteProfiles Pre-SET domain profile. 1287 1363 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc151039g00009 1521 SMART preset_2 1223 1350 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc151039g00009 1521 MobiDBLite consensus disorder prediction 916 949 - -
Stsc151039g00009 1521 ProSiteProfiles Zinc finger C2H2 type domain profile. 957 985 IPR013087 -
Stsc151039g00009 1521 SMART set_7 1366 1504 IPR001214 GO:0005515
Stsc151039g00009 1521 Pfam Zinc finger C2H2-type, 3 repeats 854 981 IPR040689 -
Stsc151039g00009 1521 ProSiteProfiles SET domain profile. 1366 1498 IPR001214 GO:0005515
Stsc151039g00009 1521 Gene3D SET domain 1216 1521 IPR046341 -
Stsc151039g00009 1521 MobiDBLite consensus disorder prediction 79 107 - -
Stsc151039g00009 1521 MobiDBLite consensus disorder prediction 8 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00009 Stsc-Chr151039 76856 84188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00009 124 1520 C2H2 Transcription Factor Family AT2G23740 51.414 0.0 1382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc151039g00009 Pre-SET 1.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00009 - - adu:107487826 2846.23