Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00007 ATGTCCCATCATCAGCAAGATTACCACCAGCATCAGCAGCAAGCACCAGGAATCTACAGCTTCCCTAATGGCTTCGACAGATCAACGGTGACACACCAACAACCGCAGATCCGAAGGGAACACAACAAAGCCTTCGATGCACCGCCACCACCATTAGTAGGGATAGACGAGGAAGAAGAACAACCACCGGCAGCAGCAGCAGGAGGAGGAAGCCTTCCTCATGTCTATGAAACCGCAGGCATGCTTTCTGAGATGTTCAGTTTCCCCGCCACGGAGCTTCTCGAACAGCAGCACCACCATCACTTCCGGCCGCCTTCCTCCTCCAGTAGGCCACAACCACCGGAGAATTGGTACGGAAGCAGGCAAGGGATGGCAGCCACGACGCAGCAGCAGATTTCAAGCATGAATGCGGATTCAGCTGCAGCCATGCATCTTTTTCTGATGAATCCACCTCAAAGGAGATCTCCTTCGCCTCCTCCATCGGCTACCTCTTCCACTCTCCACATGCTTCTTCCCAACCATTCCTCCGCCTCCTTACAAGGATTCGCTCCTCCTCCTCCTCCTCCTGGCTCCGCAGGAGCCTCTTTCGGGCAATTCACATGGATTCCCGATAGCGGCGGTGGCGGCCATGAAGGAGCAAGTAACACCCCTGGTGGGAACGTGGTGGAAGGGCAAGGGCTTTCGCTGTCTCTATCGTCTTCGCTTCAGCACTTGGAAGCTGCGAAAGCGGAGGAACTGAGGATGGGAGACGGTGGTTTTCTGTTTTATAATCAAGGCGGTGGAAGCGGCGGCGGAGGAGGCCCCTCTTCTAATTCCGGTAATTTTGCTTACAACAAGAATCAACAGCAATTGCATTTGCAAGGTGCTGCCATGGTGGGAGTGGGACAGGGCCACCTTAGTGGATTCTCTTCTACTTCATCGTCCCCGTCCTTAGGGGTAGTCCATGTTCTCAGGAATTCAAAGTATGTGAAGGCCGCACAAGAATTGCTTGAGGAATTTTGCAGTGTTGGAAGGGGCCATTTCAAGAAGAACAAATTCAGCAGACAGAATTCAAACCCTAATTCTACGGCGTCTCCTTCGTCTTCAAAAGATCCTCCTCCTTCTGCTCCGCCTCCTTTGTCAGCCTCCGATAGGATTGAGCATCAGAGAAGAAAGGTCAAACTTCTATCAATGCTTGACGAGGTGGACCGAAGATACAACCACTACTGCGAGCAAATGCAGATGGTGGTGAACTCATTTGACGTGGTGATGGGGTACGGGGCGGCGGTGCCGTACACGGCGCTGGCACAGAAGGCCATGTCAAGGCATTTCCGGTGCCTGAAGGATGCGATAACAGCGCAGCTGAAGCATTCGTGTGAGGTGTTGGGGGAGAAGGATGGGGCGGGAGGATCTGGGCTGACGAAGGGGGAGACGCCGCGGCTGAAGATGTTGGAGCAGAGCCTCCGGCAGCAGAGAGCGTTCCAGCAGATGGGTATGATGGAACAAGAAGCTTGGAGACCTCAGAGAGGCTTGCCTGAGCGTTCTGTCAACATTTTGAGAGCTTGGCTTTTCGAGCATTTTCTCCATCCGAAAGAAAGGTTCCAAGATAGGGGCAGGGGTACAGAAAGCTTGGTGTCTCTTTATACAGTTATGGCAACCTCTCTCTCTCATGTCATTTTCTGGTCTCTTTCTCAGGTATCAAACTGGTTCATAAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAGCAAGAACTCAAAGAAGCAGAGGAGTGCGGTGGTGGAGGGGAAGACGAAGAAGAAGATCAAGAAGATGAAGAAAAAGACAACCAGCAGCAACAAATTGGAAGCACAACAGCACCACCGCCACCGTCATCAACGAATAATAATAATGGAGATGAAAGCGAAATACAAGTAGGAGAAGGGTTTTCGGAAAACCAAGAGGAGGGGAGCAATAGCATGATGGTGGCGCAAGGTGGAATGGCACAGCCACAGCCCCCACAGTCACAGTCGCAGAGATCGATGGCAAGCGATGACACGTGTCGCCATGGCAGCTACGTAGCAGGTGGTGAATATGGGACCGCCTCTGCTGCTGCTGCTGCTGCTGCTGACATTGGATCCGCTACCCTGATTAGGTTCGGGACCACCGCCGGTGACGTGTCACTCACCCTAGGGTTACGCCACGCCGGGAACGTCGTCAACATGCCCCCCCGACAAAACCCCTTTTTCTCTTAG 2226 0.5301 MSHHQQDYHQHQQQAPGIYSFPNGFDRSTVTHQQPQIRREHNKAFDAPPPPLVGIDEEEEQPPAAAAGGGSLPHVYETAGMLSEMFSFPATELLEQQHHHHFRPPSSSSRPQPPENWYGSRQGMAATTQQQISSMNADSAAAMHLFLMNPPQRRSPSPPPSATSSTLHMLLPNHSSASLQGFAPPPPPPGSAGASFGQFTWIPDSGGGGHEGASNTPGGNVVEGQGLSLSLSSSLQHLEAAKAEELRMGDGGFLFYNQGGGSGGGGGPSSNSGNFAYNKNQQQLHLQGAAMVGVGQGHLSGFSSTSSSPSLGVVHVLRNSKYVKAAQELLEEFCSVGRGHFKKNKFSRQNSNPNSTASPSSSKDPPPSAPPPLSASDRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGYGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCEVLGEKDGAGGSGLTKGETPRLKMLEQSLRQQRAFQQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPKERFQDRGRGTESLVSLYTVMATSLSHVIFWSLSQVSNWFINARVRLWKPMVEEMYQQELKEAEECGGGGEDEEEDQEDEEKDNQQQQIGSTTAPPPPSSTNNNNGDESEIQVGEGFSENQEEGSNSMMVAQGGMAQPQPPQSQSQRSMASDDTCRHGSYVAGGEYGTASAAAAAAADIGSATLIRFGTTAGDVSLTLGLRHAGNVVNMPPRQNPFFS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 7 32 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 654 679 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 585 634 - -
Stsc151039g00007 741 Pfam Associated with HOX 316 445 IPR006563 -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 96 133 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 149 168 - -
Stsc151039g00007 741 Gene3D - 501 578 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 609 634 - -
Stsc151039g00007 741 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 167 608 - -
Stsc151039g00007 741 SUPERFAMILY Homeodomain-like 546 580 IPR009057 -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 176 225 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 112 133 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 344 379 - -
Stsc151039g00007 741 SMART prehox3 311 446 IPR006563 -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 589 605 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 346 362 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 654 676 - -
Stsc151039g00007 741 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00007 Stsc-Chr151039 53865 60978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00007 6 580 Homeobox Transcription Factor Family AT2G23760 45.182 3.58e-137 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00007 - - adu:107487904 800.431