Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151039g00003 | ATGGAGCACGCCGAATTATCCACTGAACAGGTTCTTAGGAGGGATATCCCATGGGAAACCTACATGTCCACCAAGCTCATCTCTGGTACAACCCTCCAGCTCCTTCGCCGTTACGATCATCGTTCAGAAACCCACCGTGCACAATTGCTTGATGAGGATGGTCCTGCTTATGTTCGCATGTTTGTTCATGTATTGCGTGATATTTTCAAAGAAGAGACTGTAGAATATGTTCTAGCTTTGATTGATGAGATGCTCACAGCCAACCCTAAGAGAGCAAGACTGTTTCATGACAAGACCCTTGCAGATGAAGACACCTACGAACCTTTCCTAAGTTGA | 336 | 0.4554 | MEHAELSTEQVLRRDIPWETYMSTKLISGTTLQLLRRYDHRSETHRAQLLDEDGPAYVRMFVHVLRDIFKEETVEYVLALIDEMLTANPKRARLFHDKTLADEDTYEPFLS | 111 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151039g00003 | 111 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT H | 2 | 110 | IPR004908 | GO:0000221|GO:0046961|GO:1902600 | |
Stsc151039g00003 | 111 | Pfam | V-ATPase subunit H | 3 | 110 | IPR004908 | GO:0000221|GO:0046961|GO:1902600 | |
Stsc151039g00003 | 111 | SUPERFAMILY | ARM repeat | 8 | 110 | IPR016024 | - | |
Stsc151039g00003 | 111 | Gene3D | - | 3 | 111 | IPR011989 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151039g00003 | Stsc-Chr151039 | 23909 | 24631 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151039g00003 | 1 | 110 | Primary Pumps ATPases(2) | AT3G42050 | 78.182 | 1.59e-58 | 184 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151039g00003 | K02144 | - | lja:Lj4g3v0913490.1 | 202.216 |