Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151039g00001 ATGGAAGAAGCTCAACCCTACTCGTCCTTGCTTATTCCAACCGTTTTTCTCTTGATAGCGTTTTCTTTTCTTGCAAAATATTACAAGTCAAAATCCAAGGAGGCCAATCAGAAACTGCCACCTGGCCCATGGAAGTTACCGATAATTGGTAACTTCCATCAAGTCGCAAAAGCAGGACCATTACCACACCGTGCTTTCAGAGAGCTTGCAAAGAAACATGGCCCTATCATGCACCTCAAACTGGGTGAGAACTCCACAGTAGTTATATCTTCCCCTAAGGTAGCGAAAGAGGTGCTCAAAACCTACGATGGATCTTTCCAGAAGAGGCCTATCATTGCTGCAGTTCCAGTCATCACATATGGCCCTTCAGATATTGTGTTCTCTCCTTCCGGTGATTACTGGAGAGACATGAGGAAGATTTGTACTCTTGAGCTTTTGAGTAAGAAAAGGGTTCAGTCTCTGGCTCATGTGAGAGAAGCAGAGATTGAAAAAATCATGGAGAAGATCCGTGAATCTTCGGGTTCAGAGATCAATCTCACTGACTTGATTTTCTACTTGATAAGCTGTACTGTGTACAGGGCTGCTTTTGGGAACTCCACGATGGATCATGGTGAGTTTATAGGTCTGATCAAAGAAGCAATGCAAATCTTGGGAGGGTTTAATTGGGCGGATTTGTTTCCTTCCATCAAAGGTCTGCATTCTTTGAGTGGGTTGAAGTCCAGGGTGGAGATGCTGCACAAGAAGCTTGATAGGTTCATGGAGGTCATCATCAAGGAACATCAGGAGAAGCAGAGAGAAGGTAGGACCGATGTGGAGGACGAAGATCTTGTTGATGTTCTTTTGAGAGTGCAGCAGAGTAACAATCTCGAGACTAACCTAACAATCACACACGTCAAAGCTGTCATTGGGGACATATTTGCTGCTGGGATGGATACCACCGGAGCTACACTAGAATGGGCCATGTCAGAAATGGTAAAGAACCCAAGAGTGATGGCAAAGTTACAAGCTGAATTAAGACAAGCATTAAAAGGAAAGAAAACAATTCATGAAAGTGATATTGAAGAACTCAGTTACCTAAAGCTAGTGGTGAAAGAGGTACTAAGATTGCACTGTCCCACTCCATTGTTGATCCCTAGAGAATGCACTGAAGAAACCAACATTCTTGGCTATGATATACCAGTCAAGACCAGAGTCATGGTCAATGTTTGGGCAATTGCAAGAGATCCCGAATACTGGCATGATGCTGAGAGTTTTATACCAGAGAGATTTGAAGGTAGTTCTTTGGACTATAAAGGGAATAACTTTGAGTATTTACCATTTGGAGCAGGAAGGAGAATCTGCCCTGGCATGAATTTTGGTGTGGCTGGGCTTACACTTCCTTTGGCAATGTTAATGTACCATTTCAATTGGGAACTCCCCCATGGAATGAAGCCTGAGGATCTGGACATGACTGAAGTCCCTGGCTTGGCTATTGCAAGAAGAATTCCCTTGCGCGTCATTCCCACTGTTTATGATCCATCACTCCATCATGATGATATTTCCATCTAG 1548 0.436 MEEAQPYSSLLIPTVFLLIAFSFLAKYYKSKSKEANQKLPPGPWKLPIIGNFHQVAKAGPLPHRAFRELAKKHGPIMHLKLGENSTVVISSPKVAKEVLKTYDGSFQKRPIIAAVPVITYGPSDIVFSPSGDYWRDMRKICTLELLSKKRVQSLAHVREAEIEKIMEKIRESSGSEINLTDLIFYLISCTVYRAAFGNSTMDHGEFIGLIKEAMQILGGFNWADLFPSIKGLHSLSGLKSRVEMLHKKLDRFMEVIIKEHQEKQREGRTDVEDEDLVDVLLRVQQSNNLETNLTITHVKAVIGDIFAAGMDTTGATLEWAMSEMVKNPRVMAKLQAELRQALKGKKTIHESDIEELSYLKLVVKEVLRLHCPTPLLIPRECTEETNILGYDIPVKTRVMVNVWAIARDPEYWHDAESFIPERFEGSSLDYKGNNFEYLPFGAGRRICPGMNFGVAGLTLPLAMLMYHFNWELPHGMKPEDLDMTEVPGLAIARRIPLRVIPTVYDPSLHHDDISI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151039g00001 515 FunFam Cytochrome P450 71D8 32 501 - -
Stsc151039g00001 515 CDD CYP71-like 72 497 - -
Stsc151039g00001 515 Gene3D Cytochrome P450 31 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 SUPERFAMILY Cytochrome P450 40 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151039g00001 515 PANTHER OS08G0105600 PROTEIN 65 506 - -
Stsc151039g00001 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151039g00001 Stsc-Chr151039 5165 8605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151039g00001 17 506 Cytochrome P450 AT3G26300 42.600 3.99e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151039g00001 - K15472 aprc:113870280 597.045