Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151038g00061 TCTGAAAAATCCCTCTTTGGCGGCTCTTCCCCCCTGTTTTGGTTCGTTGACTTGACTAGACTGGAGTCCACATGCATAGAAGAAGGCGTCATTCTCCTCATCGATCCAATGGATGCAGCTATGTCTTCCGAAAACCAGGAATCCCAATCCTCATTTAACCCCTACAGAACAACCATGTGTGATGTGAATGAAAGCAAAGTTATAGAAGATATTGTTGGACATGTTACCTCCTTGCTAGATTCAACACACTTATTCATTGCAGATCATCCAGTGGGAGTAAACTCACGTGTGCAAGATTTGATCCAACTCATAAATAATCACAAATCAGATGATGTTCTTGTAATAGCTTTATGGGGAATGGCAGGAATAGGTAAAACAACAATTGCCAAAGCCCTCTACAATCAACTTAGCCGCAATTTTGATGTCAGGAAGTTTGTCCCAAACATCAGCGAAAGGATGCAAACCTTGTCCCGTGTAACTTTAAGGGAGGAGCTTCGTTATTTTCTTTGGGAAAAAGTTAGAAAGGTGCCTAACTTGGACCAACGTGGTTTAAAAGCATTTCTTGTACTTGACAATGTGAGAAGTCAAATAGAGTTGGAGGTTTTGCCATTATCTCTTGAATGTTTTCTTCCTGGGAGTATAATAATCATCACCACAAGGATTAAACATGATCGACTTCATGAGCTTGGAGTTAGTCATATATATAGAGTGAAAGAAATGGACTATAACGAATGTGTTGAACTTTTTAGTTGGACCGCATTCAAGAAAGCAACTCCCGAAAGGAGTTTTTCCTTGCTTATTAATTATGCAGTTGAATATTCTGATGGACTGCCGCTGGCTCTGGTGGCTGTTGGCTCTGCATTATCTGAAGAAACTATAGAAGAGTGGGAGACTTTATTGGAAAGGTTCAATACATTTCCCCTTCAAGATGTACGGAAGATTTTAAAAGAAAGCATTGATTCTGTTGGATATAGTGAGAAGAAAATGTTTCTTGAACTAGCTTATTTGAGTCATTTCCTTGTTGGAATGGACCGAAATGATATAAGTAAGTTATTAAAAGAAGCTGGATATCACGATGCACCAAGAGCAATTAAAGTGCTTGAAGAGCATAGTCTTTTGTGGTTTAACAAAGACAAGCTTTGCATGCATCGTTTGCTACAACACATCGGAAGAGAAATTTATCTCAAGGAATCATCCATTGAGTCTCAGCAAAAGCCATATGATGTATTCTTAAGCTTTCGAGGCAAAGAAACTCGTTCAAAGTTCATCTCACATCTTCATGCATCTCTTGAAAATGCCGGTCTCTATGTTTTCAAGGATGATAATGGGTTAGCAAGAGGGGAAAATATCTCAATCTCACTTATGAAAGCAATTGGAGAGTCTAAAACTTCTATAATTATTTTGTCACCAAATTATGCATCTTCAAGATGGTGTTTGCAAGAGTTGGAAGACATCATGCTATGTTGTAAAAACAAAACTCAAAAAGTGCTGCCAGTATTCTACTGTACAGATCCCTCAGAAGTGCGCAGTCAAACCGGTAAGTTTGGACAAGCTTTTGATAATCTTGTGAAAAAACACCCACATAAATTAAAAGTCAAGGATCAGATCTGGAGGAATGCACTCTGCGAGGTTGGGGGCCTTGCAGGGTTTGTCATCCGAAAATCCAGGAATGAAAGTGAAGATGTTAAGAACATTGTTGAGCATGTTACGCACATGCTAGACATGAAGGAATTGTTGTTGCTAATCATCCCGTAG 1755 0.3909 SEKSLFGGSSPLFWFVDLTRLESTCIEEGVILLIDPMDAAMSSENQESQSSFNPYRTTMCDVNESKVIEDIVGHVTSLLDSTHLFIADHPVGVNSRVQDLIQLINNHKSDDVLVIALWGMAGIGKTTIAKALYNQLSRNFDVRKFVPNISERMQTLSRVTLREELRYFLWEKVRKVPNLDQRGLKAFLVLDNVRSQIELEVLPLSLECFLPGSIIIITTRIKHDRLHELGVSHIYRVKEMDYNECVELFSWTAFKKATPERSFSLLINYAVEYSDGLPLALVAVGSALSEETIEEWETLLERFNTFPLQDVRKILKESIDSVGYSEKKMFLELAYLSHFLVGMDRNDISKLLKEAGYHDAPRAIKVLEEHSLLWFNKDKLCMHRLLQHIGREIYLKESSIESQQKPYDVFLSFRGKETRSKFISHLHASLENAGLYVFKDDNGLARGENISISLMKAIGESKTSIIILSPNYASSRWCLQELEDIMLCCKNKTQKVLPVFYCTDPSEVRSQTGKFGQAFDNLVKKHPHKLKVKDQIWRNALCEVGGLAGFVIRKSRNESEDVKNIVEHVTHMLDMKELLLLIIP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151038g00061 584 PRINTS Disease resistance protein signature 114 129 - -
Stsc151038g00061 584 PRINTS Disease resistance protein signature 180 194 - -
Stsc151038g00061 584 PRINTS Disease resistance protein signature 274 288 - -
Stsc151038g00061 584 Gene3D - 400 580 IPR035897 -
Stsc151038g00061 584 Gene3D - 240 327 IPR042197 -
Stsc151038g00061 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 332 IPR027417 -
Stsc151038g00061 584 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 53 394 IPR044974 GO:0006952
Stsc151038g00061 584 Pfam TIR domain 407 571 IPR000157 GO:0007165
Stsc151038g00061 584 SUPERFAMILY Toll/Interleukin receptor TIR domain 398 550 IPR035897 -
Stsc151038g00061 584 Gene3D - 77 227 IPR027417 -
Stsc151038g00061 584 SMART till_3 406 547 IPR000157 GO:0007165
Stsc151038g00061 584 Pfam NB-ARC domain 97 322 IPR002182 GO:0043531
Stsc151038g00061 584 ProSiteProfiles TIR domain profile. 405 544 IPR000157 GO:0007165
Stsc151038g00061 584 FunFam Disease resistance protein (TIR-NBS-LRR class) 403 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151038g00061 Stsc-Chr151038 428538 432007 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151038g00061 91 398 WRKY Transcription Factor Family AT5G45050 30.503 6.67e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151038g00061 - - ahf:112749552 702.975