Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151038g00060 ATGGGAGGGAGTGGCAAAACAACCATTGCTAAAGCAGTTTATAATAAAATTTTCCGTGAATTTGAAGGCCGGTGCTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGACAATGGAATTCTTCATTTACAACAGCAACTTCTTTCTGCTGTCTACAAGACAACGAAAATAAAAATAGACAACACTGAATCTGGAAAATCAATATTAGAGAAAAGACTTGGCCATAAAAAGATACTTGTTGTACTTGATGATGTGGACAAATTGGAACAGATCAATTCTTTAGCTGCAAGTCGTAAATGGTTCTGTCCGGGGAGCATAATAATCATCACAACAAGAGACGAGCACCTTCTTCGTTGTCTTAAAATTGATAAGTTATATGGTATGAAAGAGTTAAATGAGAAAGAATCCATGGAACTTTTTAGCTGGCATGCATTCAAAGAACCGAGTCCAAAAAAAGAGTTTGCTTTACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAAGTGATTGGGTCACATTTGTTTACTAGGGAAGTATATGAATGGAAGGACGTTTTGAAGAAACTCAAAACTATTCCCCACAATGATGTACAGAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGGATAGAGAAATATTTCTTGATGTGGCATTTTTCTTTATTGGAATGGACAAAAATGATGTAATTGATATATTAAATGGCTGCGGGCATTCTGCTGAAATTGGAATAAATATTCTTATGGAACGATGCCTTATTACTGTGGACACTAAGAGGAAACTTGGCACGCATGGTTTGCTGCGAGACATGGGAAGAGAAATTATTCACCAAAGTTTGCCAACGAAACCTGAGAAACGGAGTAGGTTGTGGAATCCAGATGAAGTGCTTAATGTATTATCAAAAGATATGGGAACAAAAGCTATTGAGGGACTTGCTCTGAACCTGCCAAAGTCAGTGAATCCAACTCAGTTAAAGACGGAAGCATTTAAGGAGATGAAGAGACTCAGATTGCTTCAGTTTGCAAATGTGTAA 1056 0.3693 MGGSGKTTIAKAVYNKIFREFEGRCFLLNIREVWDQDNGILHLQQQLLSAVYKTTKIKIDNTESGKSILEKRLGHKKILVVLDDVDKLEQINSLAASRKWFCPGSIIIITTRDEHLLRCLKIDKLYGMKELNEKESMELFSWHAFKEPSPKKEFALLANEVVSYCERLPLALEVIGSHLFTREVYEWKDVLKKLKTIPHNDVQKKLKISFDGLSDDRDREIFLDVAFFFIGMDKNDVIDILNGCGHSAEIGINILMERCLITVDTKRKLGTHGLLRDMGREIIHQSLPTKPEKRSRLWNPDEVLNVLSKDMGTKAIEGLALNLPKSVNPTQLKTEAFKEMKRLRLLQFANV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151038g00060 351 PRINTS Disease resistance protein signature 165 179 - -
Stsc151038g00060 351 PRINTS Disease resistance protein signature 72 86 - -
Stsc151038g00060 351 PRINTS Disease resistance protein signature 338 351 - -
Stsc151038g00060 351 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 348 IPR044974 GO:0006952
Stsc151038g00060 351 Pfam NB-ARC domain 1 204 IPR002182 GO:0043531
Stsc151038g00060 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Stsc151038g00060 351 Gene3D - 1 124 IPR027417 -
Stsc151038g00060 351 Gene3D - 130 214 IPR042197 -
Stsc151038g00060 351 SUPERFAMILY "Winged helix" DNA-binding domain 201 307 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151038g00060 Stsc-Chr151038 427147 428454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151038g00060 1 300 WRKY Transcription Factor Family AT5G45050 34.219 9.30e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151038g00060 - - ahf:112727920 628.632