Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151038g00054 ATGGCGGGGATAGGTAAAACAACAATTGCTAAAGCCCTCTACAATCAAATTAGTAGCAATTTTGATGTGAAAAAGTTTGTCCCAAACATCAAGGGGAGGATGAAGGATAGTGTAACTTTAAAACAAGTGCTTCGTTATTTTCTTGGGGAAAAAGTCAAAAGAAAGGTACTTCTTATACTTGATAACGTGAGAAGTGAAAGAGAACTGGAGGTTTTGCCAGTAACTCTTGAATGCTTTGGTCCTGGGAGTATAATAATCATCACCACAAGGCAGGTTAAACATGATCGATTTCATGGGATAGGAGTTAATCACATATACAGAGTGAAAGAAATGGATTATAACGAATGTGTTGAGCTTTTTAGTTGGACCGCATTCAAGAAAGTAACTCCTGAAAGAAGTTTTTCCAGGCTGATTAATTATGCAATCGAATATTGTGATGGATTGCCTTTCGCTCTTGTGGCCATTGGCTCTGTGTTATTAGAGAGAAGTATTGAAGAGTGGGAGAGTGTATTGCAGAGGCTCGAGAGCAGTGGCGGAGCTTAG 543 0.3923 MAGIGKTTIAKALYNQISSNFDVKKFVPNIKGRMKDSVTLKQVLRYFLGEKVKRKVLLILDNVRSERELEVLPVTLECFGPGSIIIITTRQVKHDRFHGIGVNHIYRVKEMDYNECVELFSWTAFKKVTPERSFSRLINYAIEYCDGLPFALVAIGSVLLERSIEEWESVLQRLESSGGA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151038g00054 180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 176 IPR027417 -
Stsc151038g00054 180 Gene3D - 111 178 IPR042197 -
Stsc151038g00054 180 Pfam NB-ARC domain 36 177 IPR002182 GO:0043531
Stsc151038g00054 180 Gene3D - 1 96 IPR027417 -
Stsc151038g00054 180 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 175 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151038g00054 Stsc-Chr151038 400162 400704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151038g00054 1 160 WRKY Transcription Factor Family AT5G45050 30.508 1.21e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151038g00054 - - aip:107627622 246.899