Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151038g00045 ATGTCGGGAATAGGTAAAACTACAATTGCCAAAGGACTCCACAATCAAATTAGCCACAATTTTGATGTGACTGAATTTGTCCCAAACATCAAGGATAGGTTGGAGCGTTCTGCAGGAGAGTTTAACTATGTAAAAGAGTGGCTTCGTTGTTCTTTTCAAAAACAAGTTTCAACAGAAGCGCGTAACTTCTTCACAGATACTATTATATTGGAGAAAAAGCTTCGATACATGAAGGTATTTCTTGTACTTGACAATGTGAGAAGTGGAAAAGAGCTGGAGGTTTTGCCAGTAGCTTATGAATGCTTTGGTCCAGGGAGTGTAATAATCGTCACCGTGAGGATCAAACCTGATCTATTTCATCTGAGTGGAGTTAATCAAACATACAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAAGAAACCAACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTACCACTGGCTCTTGTGGCTGTTGGCTCTGCATTGTCTGAAAAAGGTATAGAAGAGTGGGAGAATGTATTGGATTGGCTCAAAAGTGTTCCCCTTCAAGATTTATGGGAAACTTTAAAAGAAAGCATTGATTCTGTTGAATATAAAGAGAAGAAAATATTTCTTGAACTGGTTTATTTGAGACATGTCTTTATTGGAATGGGCCGAAATGATGTAACTAGATTATTACTAAAAGCTGGACATCACCAGGCAAAAAGAGCAATCAAAGTGCTTGAAGATCATAGTCTTGTGTGGTTTGACGGGGACAAGCTTTGCATGCATCGTTTGCTACAAGACACGGGGACAAAAATGTATATGGAAAATTCTTGGATTAAGCCTCAGCAAAGACCATATGATGTATTTTTGAGCTTTCGAGGAAAAGACACTCGTTCAACGTTCATCTCACATCTTCATGCATCTCTTGAAAATGCCGGTCTCCATGTGTTCAAGGATGATAATGGGATTCCAAGAGGCGAAAATGTCTCAATGTCACTTTTGAAAGCAATTGGAGAGTCTAAAACTTCTATCATTATTCTGTCACCAAATTATGCTTTCTCAAGATGGTGTTTGCAAGAGTTGGAAGACATTATCCTATGTTATAAAAACACAACTCAAAAGTTGTTACCGGTGTTCTACAATGCAGATCCCTCAGAAGTGCGAAACCAAACTGGCAAGTTTGGAAAAGCTTTTGAAAGACTTCTGAAAATATCCCCAATAATGGAACATGGCAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTTGGGTGCATTGCAGGGATTGTCATCCGAAAATCCAGGAATGAAAGTGAAGATATTAAGAACATTGTTGAGCATGTTACTCATATGCTGGACATGAAGGAGTTGTTTGTTGCTAATCATGCGGTCGGAGTTGAATCTCGTGTTGAAGAAGTGATTGTGCTATTAAAAAACCAGCAACAAGAAAATCCTCTACTACTAGGTATATTGGGCATGGGAGGGAGTGGTAAAACAACCATTGCTAAAGCAGTTTATAATAAGATTTTCCGTGAGTTTGAAGGCCGGTGCTTCCTCATAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTCATTTACAACAGCAACTTCTTTCTGCTATCTACAAGACAACAAAAATAAAGATAGAAAACACTGAATCTGGAAAATCAATATTAGAGAAAAGACTTGGCCAGAAAAAGATACTTCTTGTACTTGATGATGTGGACAAATTGGAACAGATTAATTCTTTAGCTGCAAGTCGTAAATGGTTCTGTCCAGGGAGCACAATAATCATCACAACAAGAGACGAACATCTTCTTCGTTGTCTTAGAGTTGACAAGTTATATAGTATGAAAGAGTTAAATGACGATGAATCCATGGAACTTTTTAGCTGGCATGCATTCAAAGAGCCATGTCCGAAAGAAGAGTTCGCTTTACTTGCTGATGAAGTTGTTTCATATTGTGAGAGATTGCCTCTCGCTCTTGAGGTGATTGGGTCCTATTTGTTTACTAGGGAAGTAAAAGACTGGAAGACTGTTTTGAAGATACTCAGAGCTATTCCGCACAATGATGTACAGAAGAAGCTTAGAATAAGCTTTGATGGTCTAGATAATGATACGCAAAGAGAAATATTTCTTGATGTGGCATTTTTCTTTATTGGAATGGACAAAAATGATGTAGTTGATATACTAAATGGCTGTGGGCATTCTGCTGAATTTGGATTAGATATTCTTATGGAACGATGCCTTATTTCCATGGACACTAAGAGGAAACTTGGCATGCATGGTTTGCTCCGAGACATGGGAAGAGAAATTATTCGCGAGAAGTTGCCAGCGAAACCTGAGGAACGCAGTAGATTGTGGAATCCAGAGGAAGTGCTCGATGTATTATCAAAAGACATGGGAACAAAATCTATTGAGGGACTTGCTTTGAACCTGCCAAACTCAGTGAATCCAACTCAGTTAAAGACGAAAGCATTTAAAAGGATGAAGAGACTCAGATTGCTTCAGTTTGCAAATCTGCAACTTGCTGGAGACTTCAAATACCTTTCAACAGATCTTCGATGGTTGTGTTGGCATGGATGTCCTTCAGAATATGCATCTGCAAACTTTGAACAAGGAAATTTAGTTGCGATTGACTTCAAATATAGCAAGCTTAAGTTACTATGGAAGAATGGTCAGATGATGAAGCAGCTAAAAATTCTGAATCTCAGTCATTCTCAACACTTGACACAAACTCCTAACTTTTCAAATTTGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTCGATTTCTCATACCATTGAACACCTCAAGCAAATTCTCCTAATAAATTTGAAAGGGTGTTCAGGGCTTCGTGTACTTCCAAGAAGCATTTACAAGTTGAAATCTCTCAAAACTCTTAATCTTTCAGGATGTTCATTGATAGGTAAGTTAGAAGAGGACATAGAACAAATGGAATCATTGACAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCGCATGCACTACTAAGATTAAAGAGCATTGTATATGTTTCTTTGTGCGACTTTGAAGGATTATCGCGCAATGTGTTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAATTTCTCACCCCAAGTGCAATCATTTTTGGACCTGTCAAATCTAGTTTCCTTAATAGTTCCAAGTGGAAACTCTCAAGGCCTATCATCCATCACCAGAGGACTTCCACAGGTTCAGAACGTCTGGCTGGAGTGTAGCTCACAACTTCAAATAACAGATGTAGCTTCCGATACCTTTGATGTCACAAACTGCGATGATATGATAGTAACATCAAGTGCATCAAATGTCTCAAAAGGGAGTACCTCATCATTTGCTGGTTGTTGCAGCGAACATGACATTGTTGAATCAGAAAATTCCTTGAATCCAATTTTAATCCGAATGGGAATGAAATGTTCTGTCACAGAGGTACTTATAGGGAATATTTTCAAGAAATTTAGTGTCAGAGTATCAGGAGATTGTTTGCTTCCTGGCAACAAGCATGCTGATTGGTTCACATTCAGTGGCATAGATTCTTCTGTAACTTTCGACGTTCCTCAAGTGAATGGGCGCAAGTTAAAGACAGTGTTGTTGTGTATAGTATATTCTTCTTCCCCAAACAATGTACCATCAGAAGGCCCAATTCTCAAAAATCTGTTTATCATAAATCAAACGAAGACCACCCCTTATGTCTACGATGGAGATACACTGGCTTCACTTAGAGATGAGGAATGGCAGAAAGTAATATCAAACCTTGAGGCTGGTGACAAAGTGCATATTGTTATTGTTGCTAAGTTAGGAATCACAGTGAAGAAGACAGCAGTTTATCTCATATATGGTGAACCAGTTAACCAAACCACAGAGCAACAAGCTGAAGGTATTGTTTCTGGTGATGATATGGTTGCAGATGCAAATCTCACTGTTCATGGTGGAGATGAAAAAAAAACTTTGAACTCACTTAGAAAACGAAAATTCCAGAGAGTATGA 4086 0.3837 MSGIGKTTIAKGLHNQISHNFDVTEFVPNIKDRLERSAGEFNYVKEWLRCSFQKQVSTEARNFFTDTIILEKKLRYMKVFLVLDNVRSGKELEVLPVAYECFGPGSVIIVTVRIKPDLFHLSGVNQTYRVKEMDYNECVELFSWSAFKKPTPERSFSGLINYAIEYSDGLPLALVAVGSALSEKGIEEWENVLDWLKSVPLQDLWETLKESIDSVEYKEKKIFLELVYLRHVFIGMGRNDVTRLLLKAGHHQAKRAIKVLEDHSLVWFDGDKLCMHRLLQDTGTKMYMENSWIKPQQRPYDVFLSFRGKDTRSTFISHLHASLENAGLHVFKDDNGIPRGENVSMSLLKAIGESKTSIIILSPNYAFSRWCLQELEDIILCYKNTTQKLLPVFYNADPSEVRNQTGKFGKAFERLLKISPIMEHGKEQSWRKALREVGCIAGIVIRKSRNESEDIKNIVEHVTHMLDMKELFVANHAVGVESRVEEVIVLLKNQQQENPLLLGILGMGGSGKTTIAKAVYNKIFREFEGRCFLINIREVWDQDNGILHLQQQLLSAIYKTTKIKIENTESGKSILEKRLGQKKILLVLDDVDKLEQINSLAASRKWFCPGSTIIITTRDEHLLRCLRVDKLYSMKELNDDESMELFSWHAFKEPCPKEEFALLADEVVSYCERLPLALEVIGSYLFTREVKDWKTVLKILRAIPHNDVQKKLRISFDGLDNDTQREIFLDVAFFFIGMDKNDVVDILNGCGHSAEFGLDILMERCLISMDTKRKLGMHGLLRDMGREIIREKLPAKPEERSRLWNPEEVLDVLSKDMGTKSIEGLALNLPNSVNPTQLKTKAFKRMKRLRLLQFANLQLAGDFKYLSTDLRWLCWHGCPSEYASANFEQGNLVAIDFKYSKLKLLWKNGQMMKQLKILNLSHSQHLTQTPNFSNLPNLEKLILKYCPKLTSISHTIEHLKQILLINLKGCSGLRVLPRSIYKLKSLKTLNLSGCSLIGKLEEDIEQMESLTTLMADKTAITQVPHALLRLKSIVYVSLCDFEGLSRNVFPSIIWSWTSPTNNFSPQVQSFLDLSNLVSLIVPSGNSQGLSSITRGLPQVQNVWLECSSQLQITDVASDTFDVTNCDDMIVTSSASNVSKGSTSSFAGCCSEHDIVESENSLNPILIRMGMKCSVTEVLIGNIFKKFSVRVSGDCLLPGNKHADWFTFSGIDSSVTFDVPQVNGRKLKTVLLCIVYSSSPNNVPSEGPILKNLFIINQTKTTPYVYDGDTLASLRDEEWQKVISNLEAGDKVHIVIVAKLGITVKKTAVYLIYGEPVNQTTEQQAEGIVSGDDMVADANLTVHGGDEKKTLNSLRKRKFQRV 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151038g00045 1361 PRINTS Disease resistance protein signature 501 516 - -
Stsc151038g00045 1361 PRINTS Disease resistance protein signature 578 592 - -
Stsc151038g00045 1361 PRINTS Disease resistance protein signature 671 685 - -
Stsc151038g00045 1361 PRINTS Disease resistance protein signature 981 997 - -
Stsc151038g00045 1361 FunFam Disease resistance protein (TIR-NBS-LRR class) 296 468 - -
Stsc151038g00045 1361 Gene3D - 1 120 IPR027417 -
Stsc151038g00045 1361 SUPERFAMILY L domain-like 835 1110 - -
Stsc151038g00045 1361 SMART AAA_5 498 633 IPR003593 GO:0016887
Stsc151038g00045 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 730 IPR027417 -
Stsc151038g00045 1361 Gene3D - 133 219 IPR042197 -
Stsc151038g00045 1361 Pfam TIR domain 300 464 IPR000157 GO:0007165
Stsc151038g00045 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 225 IPR027417 -
Stsc151038g00045 1361 SUPERFAMILY Toll/Interleukin receptor TIR domain 295 441 IPR035897 -
Stsc151038g00045 1361 Gene3D - 636 720 IPR042197 -
Stsc151038g00045 1361 Gene3D - 473 631 IPR027417 -
Stsc151038g00045 1361 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 300 1089 IPR044974 GO:0006952
Stsc151038g00045 1361 Gene3D - 294 472 IPR035897 -
Stsc151038g00045 1361 ProSiteProfiles TIR domain profile. 298 466 IPR000157 GO:0007165
Stsc151038g00045 1361 Pfam NB-ARC domain 1 214 IPR002182 GO:0043531
Stsc151038g00045 1361 Pfam NB-ARC domain 481 704 IPR002182 GO:0043531
Stsc151038g00045 1361 SUPERFAMILY "Winged helix" DNA-binding domain 707 813 IPR036390 -
Stsc151038g00045 1361 Gene3D Ribonuclease Inhibitor 815 1177 IPR032675 -
Stsc151038g00045 1361 SMART till_3 299 440 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151038g00045 Stsc-Chr151038 270446 342055 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151038g00045 3 298 WRKY Transcription Factor Family AT4G12020 22.667 1.17e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151038g00045 - - ahf:112727920 2002.64