Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151038g00044 ATGGGAGGGAACACGATCGAGATCGTGAACGACGCCGAGGAGGAGCACGTTCGAGATCTAGAACGATGTTTGGGAGAGGAGCGCAACCGTGATTTTGAAAGCCGCTCAGAGCTCCAGAGTTCTACATTCTCTCTCCGTAATTCTTTGGCATTATGTTCTATTGACTGCATGCGGTGCCTCAGCTATTGGTTGATTCAAAATTCATTCGAATTGATCCTTCCGAAAGGTCATGAGAATGGTGATCAGCGTTGTTCTTGGGATCCTTCGCCTCCCCAGATTGGTAACATGGGGCTGAGGCCTCCCATTTTGGATAGCTCCCAAGTCCATCGTCAACCCGGTGCCATTGTTAGCAGTGGTGTTGAGATTGTTCGGGTTTCACCACCAACTCTCACTGACGCTCTCTCACTCCCCGTGATCCACCGTGTTCCACCACCGATCAATTTCGCTGTTCCGCCCGCGATTCCTCTTGTTTTGCTTGCTCAGGGCAAAAGGGTTGCTTTGCTTGCAAACAAAGTTGCTATGGACTTGAATGCGTCGCCAGTCCCGGAGGAAGATGAAGATATCTTTGAGGGACATGTTGTCGAAGATTACCATGCGCCAGAAGAACGTGTTGAAAGTGCAGTTGACATAGCACGCCGGGAGCGTGAAGAGAGAAAACAACGATTGAAGAGAGAACGTTCTGATGACAGACCTGGGCATTTATCACAGTCGCGTGGATATGATCAGTTTTTTCAAACTAAGGCCCTTAAAACATATGATAAAAGTAGGCTTCCACCAGGTTGGTTGGACTGTCCTTCATTTGGCCAGGAAGTTTATGGTATGATCCCTTCTAAGGTTCCACTTGGTGAATCATTCAACGACTGTATTGCTCCCGGTAAAAGATACTCGTTTAAACAAGTGATACATCAGATGAGAGTTTTAGGGAGAAAACTTGGTTTGGTAATTGATTTGACAAATACCACTCGATACTATCCAGTGTCAGATTTAAAGAAAGAGGGCATTAAGCATGTTAAGATCCAATGCAAGGGGCGCGATTCAGTACCTGATAATTTGTCAGTGAATCAATTTGTCTATGAGGTCACACAATTTGTATCACGTCAAAAACACTCAAAGAAGTATATACTTGTTCACTGTACTCATGGACATAATCGTACTGGATACATGATCATCCATTATCTAATGCGGACTACATCAATGTCTGTTAGTCAGGCAATAAAAACATTTTCTGATGCACGCCCTCCAGGAATCTACAAACCTGATTACATTGATGCATTGTATGCATTTTACCATGAAAAAAAGCCTGAGATGGAGAACCATGAGACAGACACACGGTTGACAAATGATGATGTTTTGGGAGATGAGATTCCTTCTGATCAGCAGGATGCATTCCGGCAGTTCTGTTATCAAACACTTAAATTGGGTGTTGGGCCCAGGGGACATACACAATTTCCAGGTTCACATCCAGTTTCTCTTAACAGGGAGAATTTGCAGTTGTTACGACAACGTTATTATTATGCAACATGGAAAGCTGATGGTACAAGATATATGATGCTAATAACGATGGATGGGTGTTACTTAATTGATAGAAATTTCAACTTTCGAAGGGTCCAAATGAGGTTCCCCTGCAGGGGTTCAAATGAGGGTTTGGGCGAGAAAACCCATCACTTCACATTACTTGATGGTGAGATGGTTATAGATACATTGCCAGATTCACATAAGCAAGAGAGAAGATACCTTATATATGATCTGATGGCAGTCAACCAAGTATCCGTGATAGAGCGACCCTTCTATGAACGGTGGAAGATGCTCGAGAAAGAAGTAATTGAACCTAGAAATATAGAAAGGCAACATATTTTCCAGAGCAAGAACCCTTACTACAGATATGACCTGGAACCATTTAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCATGAAAGTCTGGGAGGGAATGAAAATGAAGATGACCATGTTCCTAGACTACTGCATAGTCCAGTTACATAGGGGTTGGGACGATCCATATGTACCACGAACTCATGAGGGCCTGTTAAAATGGAAATATGCAGAGCTGAATTCAGTTGATTTTCTCTTTGAGGTTGATGGCGATCACCAGTTACTTTTTCTCTATGAACGTGGAAAGAAGAAACTTATGGATGGGAATAGGGTTGCATTTGGAGATGATTCAGATCCCTCAGAATATTCTGGAAAGATCATAGAGTGCTCTTGGAATTCTGATAATCAGGAATGGGTATTCCTCAGAATAAGGACAGACAAATCAACTCCAAATGAGTTTAATACATACAGAAAGGTTATGCGAAGTATTAAAGACAACATCACCGAGGAGGACTTGTTGAACGAAATAAATGAGATAATTCGCCTTCCCATGTATGCCGACCGTATAAAAGCCGACAGTAAAGCTACTCAGCACGCTAATATGGCAAGGCGAAATCGGTGA 2460 0.4297 MGGNTIEIVNDAEEEHVRDLERCLGEERNRDFESRSELQSSTFSLRNSLALCSIDCMRCLSYWLIQNSFELILPKGHENGDQRCSWDPSPPQIGNMGLRPPILDSSQVHRQPGAIVSSGVEIVRVSPPTLTDALSLPVIHRVPPPINFAVPPAIPLVLLAQGKRVALLANKVAMDLNASPVPEEDEDIFEGHVVEDYHAPEERVESAVDIARREREERKQRLKRERSDDRPGHLSQSRGYDQFFQTKALKTYDKSRLPPGWLDCPSFGQEVYGMIPSKVPLGESFNDCIAPGKRYSFKQVIHQMRVLGRKLGLVIDLTNTTRYYPVSDLKKEGIKHVKIQCKGRDSVPDNLSVNQFVYEVTQFVSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRTTSMSVSQAIKTFSDARPPGIYKPDYIDALYAFYHEKKPEMENHETDTRLTNDDVLGDEIPSDQQDAFRQFCYQTLKLGVGPRGHTQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFNFRRVQMRFPCRGSNEGLGEKTHHFTLLDGEMVIDTLPDSHKQERRYLIYDLMAVNQVSVIERPFYERWKMLEKEVIEPRNIERQHIFQSKNPYYRYDLEPFRVRRKDFWLLSTVMKVWEGMKMKMTMFLDYCIVQLHRGWDDPYVPRTHEGLLKWKYAELNSVDFLFEVDGDHQLLFLYERGKKKLMDGNRVAFGDDSDPSEYSGKIIECSWNSDNQEWVFLRIRTDKSTPNEFNTYRKVMRSIKDNITEEDLLNEINEIIRLPMYADRIKADSKATQHANMARRNR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151038g00044 819 Gene3D - 727 795 IPR012340 -
Stsc151038g00044 819 FunFam mRNA capping enzyme family protein 253 462 - -
Stsc151038g00044 819 MobiDBLite consensus disorder prediction 215 237 - -
Stsc151038g00044 819 FunFam mRNA capping enzyme family protein 687 795 - -
Stsc151038g00044 819 PANTHER MRNA-CAPPING ENZYME 251 800 - -
Stsc151038g00044 819 SMART dsp_5 291 431 IPR020422 GO:0006470|GO:0008138
Stsc151038g00044 819 Pfam mRNA capping enzyme, C-terminal domain 693 786 IPR013846 -
Stsc151038g00044 819 Coils Coil 208 228 - -
Stsc151038g00044 819 ProSiteProfiles Dual specificity protein phosphatase domain profile. 284 435 IPR020422 GO:0006470|GO:0008138
Stsc151038g00044 819 SUPERFAMILY Nucleic acid-binding proteins 691 803 IPR012340 -
Stsc151038g00044 819 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 448 689 - -
Stsc151038g00044 819 ProSitePatterns Tyrosine specific protein phosphatases active site. 376 386 IPR016130 GO:0016311|GO:0016791
Stsc151038g00044 819 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 257 442 IPR029021 -
Stsc151038g00044 819 CDD Adenylation_mRNA_capping 475 689 IPR001339 GO:0004484|GO:0005524|GO:0006370
Stsc151038g00044 819 CDD RNA_5'-triphosphatase 260 426 - -
Stsc151038g00044 819 FunFam mRNA capping enzyme, putative 446 686 - -
Stsc151038g00044 819 MobiDBLite consensus disorder prediction 215 235 - -
Stsc151038g00044 819 Gene3D Protein tyrosine phosphatase superfamily 233 447 IPR029021 -
Stsc151038g00044 819 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 354 423 IPR000387 GO:0016311|GO:0016791
Stsc151038g00044 819 Gene3D DNA ligase/mRNA capping enzyme 448 688 - -
Stsc151038g00044 819 Pfam mRNA capping enzyme, catalytic domain 487 688 IPR001339 GO:0004484|GO:0005524|GO:0006370
Stsc151038g00044 819 Pfam Dual specificity phosphatase, catalytic domain 310 429 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151038g00044 Stsc-Chr151038 251076 267148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151038g00044 172 810 Protein tyrosine phosphatase (PTP) family AT3G09100 64.861 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151038g00044 K13917 - gmx:100776633 1098.19