Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151038g00016 ATGATTGCTGAAGCTTTTAATGATCTTTTGAACAGGATAAAAGTGGAGGAAGACAAGGTGTTGAGTTGGAAGACAACACTAGCAGAAATTGGTGCCATAAAAGGGCCTGTCATAGTAATAAATTCCAGAGCAGGGAGCAGAATGATCATCACAACAAGAAATAAGAAGTTGGATAGAATTGGGATAAGGAAAGAGGATTTGGCTAGAGTAGGCTCCGAAATTTATACACTGAAACAAATGGATGAGACAGAATCTATTGAGCTCTTTAGTTGGCATGCATTCAAGGAAGCAAGTCCCAGTGAAGATTTGTATGAACTTTCTGGACTGATAGTTTCATATTCTCGGGGATTGCCGCTGGCTCTTGAAGTCCCGAGATCCCATTTGCATGAAAAGGAATTAGCAGAGTGTTGA 411 0.4039 MIAEAFNDLLNRIKVEEDKVLSWKTTLAEIGAIKGPVIVINSRAGSRMIITTRNKKLDRIGIRKEDLARVGSEIYTLKQMDETESIELFSWHAFKEASPSEDLYELSGLIVSYSRGLPLALEVPRSHLHEKELAEC 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151038g00016 136 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 44 131 IPR044974 GO:0006952
Stsc151038g00016 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 132 IPR027417 -
Stsc151038g00016 136 Pfam NB-ARC domain 42 131 IPR002182 GO:0043531
Stsc151038g00016 136 Gene3D - 79 135 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151038g00016 Stsc-Chr151038 90193 90946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151038g00016 21 123 WRKY Transcription Factor Family AT5G45050 29.091 4.32e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151038g00016 - - tpra:123910017 92.4337