Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151037g00066 ATGAAGAGACCTTTCTTCTTCTCCTTCTCCTCCTCCTTCTTCTTCTTTCTCACATTCTCCTTCTGCCACAGACACCTACTTGTCTTCTCTGCTACCACTACCTTACCACTACAACTCATTTCTCTACTCTCAATAAAATCATCCCTCATAGACCCAAACAACATCCTCCATGATTGGGACCCTTCATCATCTTTCTCCTCCAACACCAACAATCATGACCACCCTATATGGTGTTCATGGACTGGCATCATTTGCCATCCAAAAACATCACAAATCACCACCTTGGACCTCTCAAACCACAACTTCTCAGGCATAATCTCACCCCAAATCAGGTACCTAAGTACACTAAACCACTTGAACCTAAGTGGGAATGTCTTCAGTGGAACCTTCCAACCTGCAATCTTTGAGCTCAGTGAGCTTCGGACTTTGGATATCAGCCACAACTCCTTCAACTCAACGTTCCCACCAGGGATATCTAAGCTCAGGTTCTTGAGAGTCTTCAATGCTTACAGCAACAACTTCATTGGACCTCTTCCACAAGAACTCTCCATGCTTTGCTTCCTCGAACACCTCAACCTCGGAGGAAGCTACTTCAATGGCACAATCCCATCAAGTTATGGCTCCTTACCAAGACTCAACTTCTTATTCCTCGCCGGAAACTCATTGAAAGGTCCAATTCCACCCCAACTAGGCCACCTCACACAGCTACAGCACATGGAAATTGGTTACAATCCATTGGAATCACCATTACCAACAGAGTTATCAATGTTAACCAAACTCAACTACTTGGACATCTCAAGTACTAACACCACAGGTCCTCTGATTCCAGAACTTGTTGGGAACTTAACAATGCTGGAGACACTGTTGCTGTTCAAGAACAAGTTAACAGGTGAAATCCCAAGAACCATAGGGAACTTGAAGTTACTGAAAGCTCTTGATTTGTCAGATAACAAACTCACTGGTTCAATTCCTGAAGAATTATCAATGCTAAAGGAACTCACCTACTTGGGGCTGGAACTGAACAATCTAACAGGGTCAATTCCACAAGCAGTTGGTGACCTTCCAAACTTGAACTTCTTCCTTCTCTTCAACAACTCACTCACCGGAATTCTTCCTCAGAAGCTTGGCTCCAAAGGTTTGTTACAGAAAGTGGATGTTTCAACCAACTTTCTAGAAGGTCCCATTCCTCCAAGCCTCTGCAACGGCAACAACCTCAGCAGGCTCATCCTCTTCTCTAACCGTTTAAACGATTCTCTTCCGAGTTCACTTGTTAACTGTATCTCCCTCTCAAGGGTTCGCATTCAGAATAACCGCCTCAGCGGTCAAATTCCGTTAGGTCTCGGTCAACTTCCTAACCTGACGTTCCTTGACATCAGCGACAACGAATTCACCGGGAGAATTCCCGAGGATTTCGGCAATGCCGTAAGGCTTCAGTTCTTGAACATATCCGGCAACGCGTTCGAGAGCGCGTTGCCGAGCAACATATGGAACTCCACCAGTCTCCAGATCCTCTCCGCCGCGGGTTCCAAGATCACCGGCCAGATTCCTGACTTCGTAGGGTGCATGAACATATACAGGATCGAGTTGCAGGGGAATTCACTCACCGGAAGCATTCCGTGGGATATTGGACACTGCGAGAAGCTGATTCAGCTGAACCTGAGTAGAAACTCGCTCACCGGAATCATTCCATGGGAGATCTCGGCGCTCCCTTCGATCACCGACGTGGATCTCTCGCACAACTCACTCACCGGAACTATTCCTTCGAACTTCAACAACTGCACCACGCTCGAGAACTTCGACGTCAGTTTCAACTCCCTCACCGGACCTATACCTTCGTCGGGGATCTTCCCGAACCTCCACCAGTCGGAATTCTCCGGCAACCCTGGCCTCTGCGGCGGCATGGTTGCGAAGCCATGCGCGGCTGAGATGCTAAGCCCGGAGGACAACCAGGTGGACGGTCGCCGTCAGGAGCCGAGGAAAACTGCCGGCGCGATAGTGTGGATCGTTGCGGCGGCGTTCGGGATCGGAGTTTTCGTCCTCGTAGCGGGGACACGGTGCTTCCACGCGAATTACGGCCGCCGTTTCGGTAACGACGGTCAGGAGATCGGACCGTGGAAGTTAACGGCGTTTCAACGGCTTAATTTCACGGCGGATGATGTGTTAGAGTGTTTGTCGATGTCTGACAAGATCTTAGGTATGGGGTCCACTGGAACGGTTTACAGAGCGGAAATGCCATGTGGCGAGATCATAGCGGTTAAGAAGCTGTGGGGAAAGCAAAAGGAGAATATCCGACGGAGGAGAGGGGTTCTTGCTGAGGTGGAGGTGCTGGGGAACGTGAGGCACAGGAATATAGTGAGGTTGTTAGGGTGCTGCAGCAACAAAGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGCAACTTAGATGACTTGTTGCATGGCAAGAACAAGGGTGATAATCTCGTTGCTGATTGGTTCACTAGGTACAAGATTGCCCTTGGTGTGGCACAGGGGATTTGCTACCTTCACCATGATTGTGATCCGGTCATCGTTCATCGAGATCTTAAACCTAGTAATATTTTGTTGGATGCGGACTTGGAGGCTAGGGTGGCTGATTTCGGGGTAGCCAAGTTGATTCAGACAGATGAATCCATGTCCGTTATTGCCGGATCATATGGTTATATTGCCCCGGAATACGCATATACCCTTCAAGTAGATGAAAAAAGTGACATTTACAGTTATGGGGTGGTGTTAATGGAGATCTTAAGTGGAAAACGTTCAGTGGATGCAGAATTTGGAGATGGGAACAGCATTGTTGATTGGGTGAAGTCCAAGATAAAATGCAAAGATGGGATTGATGATATATTAGATAAGAATGCAGGTGCAGGGTGTTCCTCAGTGAGGGAAGAGATGATTCAAATGCTTAGAATTTCATTGCTTTGCACAAGCAGGAACCCAGCTGANNNNNNNNNNTATGAGGGATGTAGTGTTGATGCTTCAAGAAGCCAAGCCCAAAAGGAAGTTGCTGGATAG 3036 0.4783 MKRPFFFSFSSSFFFFLTFSFCHRHLLVFSATTTLPLQLISLLSIKSSLIDPNNILHDWDPSSSFSSNTNNHDHPIWCSWTGIICHPKTSQITTLDLSNHNFSGIISPQIRYLSTLNHLNLSGNVFSGTFQPAIFELSELRTLDISHNSFNSTFPPGISKLRFLRVFNAYSNNFIGPLPQELSMLCFLEHLNLGGSYFNGTIPSSYGSLPRLNFLFLAGNSLKGPIPPQLGHLTQLQHMEIGYNPLESPLPTELSMLTKLNYLDISSTNTTGPLIPELVGNLTMLETLLLFKNKLTGEIPRTIGNLKLLKALDLSDNKLTGSIPEELSMLKELTYLGLELNNLTGSIPQAVGDLPNLNFFLLFNNSLTGILPQKLGSKGLLQKVDVSTNFLEGPIPPSLCNGNNLSRLILFSNRLNDSLPSSLVNCISLSRVRIQNNRLSGQIPLGLGQLPNLTFLDISDNEFTGRIPEDFGNAVRLQFLNISGNAFESALPSNIWNSTSLQILSAAGSKITGQIPDFVGCMNIYRIELQGNSLTGSIPWDIGHCEKLIQLNLSRNSLTGIIPWEISALPSITDVDLSHNSLTGTIPSNFNNCTTLENFDVSFNSLTGPIPSSGIFPNLHQSEFSGNPGLCGGMVAKPCAAEMLSPEDNQVDGRRQEPRKTAGAIVWIVAAAFGIGVFVLVAGTRCFHANYGRRFGNDGQEIGPWKLTAFQRLNFTADDVLECLSMSDKILGMGSTGTVYRAEMPCGEIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNKECTMLLYEYMPNGNLDDLLHGKNKGDNLVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADLEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVKSKIKCKDGIDDILDKNAGAGCSSVREEMIQMLRISLLCTSRNPAXXXXYEGCSVDASRSQAQKEVAG 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151037g00066 1011 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 227 323 - -
Stsc151037g00066 1011 Gene3D Ribonuclease Inhibitor 193 247 IPR032675 -
Stsc151037g00066 1011 ProSitePatterns Protein kinases ATP-binding region signature. 731 754 IPR017441 GO:0005524
Stsc151037g00066 1011 Pfam Leucine Rich Repeat 452 473 IPR001611 GO:0005515
Stsc151037g00066 1011 FunFam leucine-rich repeat receptor-like protein kinase TDR 804 995 - -
Stsc151037g00066 1011 PANTHER OS04G0122200 PROTEIN 391 987 - -
Stsc151037g00066 1011 SUPERFAMILY RNI-like 299 628 - -
Stsc151037g00066 1011 Pfam Protein kinase domain 728 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151037g00066 1011 SUPERFAMILY L domain-like 57 392 - -
Stsc151037g00066 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Stsc151037g00066 1011 SUPERFAMILY Protein kinase-like (PK-like) 728 935 IPR011009 -
Stsc151037g00066 1011 SMART LRR_typ_2 450 473 IPR003591 -
Stsc151037g00066 1011 SMART LRR_typ_2 209 233 IPR003591 -
Stsc151037g00066 1011 SMART LRR_typ_2 306 330 IPR003591 -
Stsc151037g00066 1011 SMART LRR_typ_2 475 498 IPR003591 -
Stsc151037g00066 1011 SMART LRR_typ_2 137 161 IPR003591 -
Stsc151037g00066 1011 SMART LRR_typ_2 569 592 IPR003591 -
Stsc151037g00066 1011 Gene3D Phosphorylase Kinase; domain 1 709 803 - -
Stsc151037g00066 1011 FunFam Leucine-rich repeat receptor-like protein kinase TDR 327 641 - -
Stsc151037g00066 1011 ProSiteProfiles Leucine-rich repeat profile. 308 330 IPR001611 GO:0005515
Stsc151037g00066 1011 ProSiteProfiles Protein kinase domain profile. 725 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151037g00066 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 695 803 - -
Stsc151037g00066 1011 PRINTS Leucine-rich repeat signature 309 322 - -
Stsc151037g00066 1011 PRINTS Leucine-rich repeat signature 569 582 - -
Stsc151037g00066 1011 Gene3D Transferase(Phosphotransferase) domain 1 804 996 - -
Stsc151037g00066 1011 FunFam Leucine-rich repeat receptor-like protein kinase 38 204 - -
Stsc151037g00066 1011 Gene3D Ribonuclease Inhibitor 248 350 IPR032675 -
Stsc151037g00066 1011 SMART serkin_6 725 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151037g00066 1011 Pfam Leucine rich repeat 91 149 IPR001611 GO:0005515
Stsc151037g00066 1011 Pfam Leucine rich repeat 524 582 IPR001611 GO:0005515
Stsc151037g00066 1011 Pfam Leucine rich repeat 285 343 IPR001611 GO:0005515
Stsc151037g00066 1011 Gene3D Ribonuclease Inhibitor 351 644 IPR032675 -
Stsc151037g00066 1011 Gene3D Ribonuclease Inhibitor 38 192 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151037g00066 Stsc-Chr151037 469549 474329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151037g00066 13 987 Receptor kinase-like Gene Family AT1G08590 41.525 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc151037g00066 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151037g00066 - - gmx:100809695 1531.92