Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151037g00043 ATGGATGCTATGATTTCTTTCTCTAACTCCAAGTGTCTTGTGACATTCCTTCTCATAATTGTCTTAACCATCACAAATTGTGGTGAAGCCAAAGGAAGGGAACTCCAAGAATCAAACACGCTTTTCATAAGAAGCTCATGCAGCTCCACAACATACCCAAAACTATGCTACACCTCTTTGGTGAAGCACGCCGCATTCATTCAAACAAATCCGGTTCTTCTGACAGGGACAGCCCTCAACATCACTCTTTCCTCCGCCAAGACAACCTCGGCCGACATGACAACCATGGCGAGGAGCCGGGGGATGGGGGCGAGGGAGGTGGCCGCCATGCAGGATTGCGTGGAGGTTCTGGCTGACTCCGTGGAGCAGCTCAGAAAATCTATCGGCGAGATGAGTCACTTGAGGACAAGTAATTTTGAGATGACAATGAGTGATGTTCAAACGTGGGTCAGCGCTGCGTTGACCGATGATACTACCTGCACTGATGGATTCCAAGAGACCGCCGTGGCCGGAGATGTTAAGACCGCCGTCCGTGGCCGCATCGTGGGGGTGGCGCAACTCACTAGCAATGCCTTGGCCTTGATTAATCAGCTAGCCAATTCCCATGCTTAA 612 0.5082 MDAMISFSNSKCLVTFLLIIVLTITNCGEAKGRELQESNTLFIRSSCSSTTYPKLCYTSLVKHAAFIQTNPVLLTGTALNITLSSAKTTSADMTTMARSRGMGAREVAAMQDCVEVLADSVEQLRKSIGEMSHLRTSNFEMTMSDVQTWVSAALTDDTTCTDGFQETAVAGDVKTAVRGRIVGVAQLTSNALALINQLANSHA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151037g00043 203 FunFam Pectinesterase inhibitor 3 38 199 - -
Stsc151037g00043 203 NCBIfam pectinesterase inhibitor domain 13 198 IPR006501 GO:0004857
Stsc151037g00043 203 CDD PMEI-like_3 45 200 - -
Stsc151037g00043 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 200 IPR035513 -
Stsc151037g00043 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 194 - -
Stsc151037g00043 203 SMART PMEI_2 38 194 IPR006501 GO:0004857
Stsc151037g00043 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 198 IPR035513 -
Stsc151037g00043 203 Pfam Plant invertase/pectin methylesterase inhibitor 42 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151037g00043 Stsc-Chr151037 296458 297069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151037g00043 33 201 Carbohydrate Esterase AT3G14310 27.907 2.79e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151037g00043 - - gmx:100305537 250.751