Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151037g00036 ATGGATATGAAAAATGGTGTTGTTGTTGTCTTATTATTAGTTCTTCTCTCTATATCCACCAATTCTTCTTCCTCTTCTGCTTCTTCAACTGATAATTACCAAAACACCCCTGAGAGTAGTAGCAATACACAACAAACTTTTTACTACAAAAGCTACATAAAAAACTCATGTAACACAGCAACATACCCTTCCATATGTTACAAGAATCTCAACCGTTATGCTTTGTCCATTCAAGCTGATCCTCTCAAGCTATGCAACACTTCTCTCTCCCTCGCCTTAAAGGCGGCTCGCTCGGCGGCCTCCACCGTCTCCAAGATCCTCAAGACCGGCAGCAACAACCTCACCGCGCAGGCGAAAGCGGTGGTGCATGATTGCTATGGGAACCTGAAAGATTCCGTTGGGGAGATGCAAGATTCCATTTATGAAATGGGAAACTTGTATGATAATGATGATAGAGACAAAGGGTTTCACTTGAGCAACATGCAGACATGGGTGAGTGCTGCTATCACCAATTATAACACATGTTCTGATGGATTTGAGGAGATGAAGAATGTGGATGGTGATCTTAGAGATAAAATCAGAAACCTTGTTTCCAATTTGGATAGGATGACAAGTAATGCCTTGTATTTCATCAACCATCTCCCGTATTAA 651 0.4163 MDMKNGVVVVLLLVLLSISTNSSSSSASSTDNYQNTPESSSNTQQTFYYKSYIKNSCNTATYPSICYKNLNRYALSIQADPLKLCNTSLSLALKAARSAASTVSKILKTGSNNLTAQAKAVVHDCYGNLKDSVGEMQDSIYEMGNLYDNDDRDKGFHLSNMQTWVSAAITNYNTCSDGFEEMKNVDGDLRDKIRNLVSNLDRMTSNALYFINHLPY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151037g00036 216 CDD PMEI-like_3 56 215 - -
Stsc151037g00036 216 Pfam Plant invertase/pectin methylesterase inhibitor 52 208 IPR006501 GO:0004857
Stsc151037g00036 216 NCBIfam pectinesterase inhibitor domain 7 214 IPR006501 GO:0004857
Stsc151037g00036 216 SMART PMEI_2 48 210 IPR006501 GO:0004857
Stsc151037g00036 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 214 IPR035513 -
Stsc151037g00036 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 208 - -
Stsc151037g00036 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 215 IPR035513 -
Stsc151037g00036 216 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151037g00036 Stsc-Chr151037 235893 236543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151037g00036 7 208 Carbohydrate Esterase AT5G53370 23.267 3.78e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151037g00036 - - aip:107634201 272.707