Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151036g00068 ATGAGTGAGAGAGGGAAAAAGGAGAAGCAAACGGAGAAAAAGGAGAGGATGAAGAACATTTTCAAGAAGCTTCACATAGGGAGCAGTAGCCACGATCCTAACCGATCCAATGAGATTCCGCCACCTGTACCCTCGCCGTCGTGCGCCGCTGATCACCGCGCTGCTGTAGCGTCACAGAATACCGGTGTATCTCCGGCGAGCCCGTCGCCGTCGTCGTCTCCCTCGGCGGCCCCGTCCGTCACTCCTTCCGGTGTCGGCGCCGCCGCAGCGATGGTCAATCGGCAGGACTTCTTCTCGTCGGAAGAGGAGTTTCAGGTGCAGTTGGCCCTAGCAATCAGCGCTTCGAACTCGGATTTCGGTGGCGATCGCGAGAAAGATCAGATCCACACGGCGACGCTTCTGAGTCTTGGTGGACACCGAATTGATTCCGCGAGGAGCAAGGATGAGGTTGCCGAGGCGCTTTCGAGGCAGTACTGGGATTACAATGTGCTTGACTATGAGGAGAAAGTGGTAGATGGTTTTTATGATGTTTATGGGCTTTCTGCTGATTCTGCAATGCAAGGAAAGATGCCATCCCTAAGAGATCTTGAAACAGACCCTGGGGATTCTAGCTTTGAAGTGGTCATAGTTAATCGAACAGTTGATCCTGCCTTGGAAGAGCTGGTGCAAATTGCACATTGTATTGCTTTAGACTGCCCTGTCACTGAGGTTGCTATTTTGGTACAAAGGCTTGCTGAACTTGTTACAAGCCATATGGGTGGTCCTGTAAAGGATGCTAGTATTATGTTGGCAAGATGGACGGAAAGGAGTACTGAATTAAGGACATCACTTTCAACAAGTTTATTACCTATTGGGTCCTTAAATATTGGGCTCTCTAGACATCGTGCTTTGCTTTTCAAGGTATTGGCTGACAATATTAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTAGAGGATGAAAGGGAGTTTTTAGTTGACCTCATGGCTGCTCCTGGAACACTTATCCCAGCTGACATTTTAAGCGCAAAAGATAGTTCCTTTAAATCTTACAATCCTAAAGTTGTGCCAAGTTTACCTTCCTCTAATGAAACTGGGTCTTCTTATTCAAGACCTACTCCTGCTGATGAAGGTAGTAGTCAAAATTCTGTGATAAAAAATCATTCACCACAATGGAATGGAAAATCATATTTTGAAAAGCCAGAGTATGCACCACCAAACTTGGGTTTCAACAAAGACACTGGTGGTCCTTCTAAGATGCCTAATAAGAGAAATACGGAAATTTCACCACCATACTCTGGTGCTTCTCTGTACAAAGGAACTCTTGGAATGAATGCAGTTGGTGATGGGACAAGATTAAATGTAAATGTAGTACCATATGCTCAGAACAACCCCAATGATTCTCACAGCCTTTTTGCAGATCTTAATCCATTTCAGATAAAAGGAACTGGGAAGACCTCTGTGCATAATATACCTGTTGAAAATAAAGCTCCTGAGCTCCAGAGTACAAGAAAAAATACTGTTCCTGGGCAGCCCCCCGTACCATGGAAGAATCGTTATGCTTACAATGAAGCTCCAAGGAAAAATAATCGTAATCCTAATGACTACAGTCCTACATTATTAGTTTCTAATAATTCTTCTTTGTCTGAAAAGATTAATCTCAATGGTAGAAAATCACCATACAGTTCAAATGTAAATAATAACATAAATGTTCAAACTTCACCTCAAGTTACTGGTTCCATGGTAACACCTATAGCAATTGAGCAGAACTGGACTCAGGATCTTAATGCTGATCACAACAGGGGAGATATGGAACATTCTCAGAATTTCATGTTGGAACCACTTAATAAAGAACATGAAAACAGTGAAAACAGTGAAATCAGAGATCTTGACTGGAGGATGACACATGACAGATTCATGGGAAGCAATTTGAAATTAAAGGAACCAGAGAGTCCTAGTTCATCAGTTGATTCCATTTCAAACAGGCCCAGGGTTGATCCAAACCCACCAATGTTGGATGATGTAGATGTTGGTGAATGCGAGATTCCATGGGAGGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATATCATGCAGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGACCAGGATTTTTCAGGTGCTGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTTCGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACCCGTCCTCCCAATCTTTCAATCATTTCAGAGTTTCTTCCAAGAGGAAGCTTGTACAGAATTCTTCATCGCCCTAATTGTCAAATTGATGAGAAACGAAGGATAAAAATGGCTCTGGATGTGGCTAGGGGCATGAATTGCTTGCACACCAGCACACCAACTATTGTTCACCGTGACCTAAAGTCCCCAAATCTTTTGGTTGACAAGAACTGGAATGTTAAGGTATGCGATTTTGGTTTGTCGCGCTTGAAGCACAACACATTTCTATCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTTCGCAATGAACCCTCAAATGAGAAGTGTGATGTTTACAGTTTTGGGGTCATCCTATGGGAGCTTGCGACTCTAAGGTTGCCATGGAGCGGAATGAATCCTATGCAAGTTGTTGGCGCTGTAGGATTCCAGAACCGTAGACTCGATATTCCTAAGGAAGTTGATCCTTTAGTTGGAAGAATAATCTGGGAATGTTGGCAACAGTAA 2814 0.4357 MSERGKKEKQTEKKERMKNIFKKLHIGSSSHDPNRSNEIPPPVPSPSCAADHRAAVASQNTGVSPASPSPSSSPSAAPSVTPSGVGAAAAMVNRQDFFSSEEEFQVQLALAISASNSDFGGDREKDQIHTATLLSLGGHRIDSARSKDEVAEALSRQYWDYNVLDYEEKVVDGFYDVYGLSADSAMQGKMPSLRDLETDPGDSSFEVVIVNRTVDPALEELVQIAHCIALDCPVTEVAILVQRLAELVTSHMGGPVKDASIMLARWTERSTELRTSLSTSLLPIGSLNIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILSAKDSSFKSYNPKVVPSLPSSNETGSSYSRPTPADEGSSQNSVIKNHSPQWNGKSYFEKPEYAPPNLGFNKDTGGPSKMPNKRNTEISPPYSGASLYKGTLGMNAVGDGTRLNVNVVPYAQNNPNDSHSLFADLNPFQIKGTGKTSVHNIPVENKAPELQSTRKNTVPGQPPVPWKNRYAYNEAPRKNNRNPNDYSPTLLVSNNSSLSEKINLNGRKSPYSSNVNNNINVQTSPQVTGSMVTPIAIEQNWTQDLNADHNRGDMEHSQNFMLEPLNKEHENSENSEIRDLDWRMTHDRFMGSNLKLKEPESPSSSVDSISNRPRVDPNPPMLDDVDVGECEIPWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVGRIIWECWQQ 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 57 80 - -
Stsc151036g00068 937 ProSitePatterns Protein kinases ATP-binding region signature. 706 728 IPR017441 GO:0005524
Stsc151036g00068 937 FunFam Serine/threonine-protein kinase isoform 1 691 778 - -
Stsc151036g00068 937 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 88 937 - -
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 1 83 - -
Stsc151036g00068 937 FunFam PAS domain-containing protein tyrosine kinase family protein 778 937 - -
Stsc151036g00068 937 Pfam Ethylene-responsive protein kinase Le-CTR1 151 349 - -
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 538 555 - -
Stsc151036g00068 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 431 445 - -
Stsc151036g00068 937 Pfam Protein tyrosine and serine/threonine kinase 701 937 IPR001245 GO:0004672|GO:0006468
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 655 684 - -
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 660 675 - -
Stsc151036g00068 937 SMART serkin_6 700 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151036g00068 937 CDD STKc_MAP3K-like 706 937 - -
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 507 555 - -
Stsc151036g00068 937 Gene3D Phosphorylase Kinase; domain 1 693 777 - -
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 507 522 - -
Stsc151036g00068 937 Gene3D Transferase(Phosphotransferase) domain 1 779 937 - -
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 1 22 - -
Stsc151036g00068 937 ProSiteProfiles Protein kinase domain profile. 700 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151036g00068 937 SUPERFAMILY Protein kinase-like (PK-like) 676 936 IPR011009 -
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 366 445 - -
Stsc151036g00068 937 MobiDBLite consensus disorder prediction 366 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151036g00068 Stsc-Chr151036 488956 497601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151036g00068 17 936 MAP Kinase Kinase Kinase AT1G08720 56.124 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc151036g00068 PK_Tyr_Ser-Thr 8.5e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151036g00068 - - aprc:113870732 1410.97