Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151036g00058 ATGTTGACTGGAAAGATCGTTGCATTAAAGAAGGTCCGATTTGACAATTTGGAACCTGAGAGTGTCAAATTCATGGCAAGAGAGATTATTATTTTGCGAAGATTGGATCATCCCAATGTTGTAAAGCTAGAAGGTTTAGTTACATCAAGAATGTCCTTGAGTTTGTATCTGGTTTTTGATTACATGGTGCACGATTTAGCCGGTCTTGCTGCAAGCCCTGAAATAAAGTTTACAGAACCTCAGGTCAAATGTTACATGCATCAACTGCTATCGGGTCTTGAGCACTGTCATAATCGACATGTACTCCACCGTGATATTAAAGGATCAAATCTACTTATCGACGATAATGGAGTACTTAAGATTGCTGATTTTGGTCTCGCATCATTCTTTGATCCGAACCGCAGGCAACCCATGACTAATCGTGTAGTAACCCTTTGGTACAGACCACTGGAGTTGCTCCTTGGTGCCACAGAATATGGTGTGGGCATTGACCTTTGGAGTGCTGGTTGCATTCTAGGAGAGTTATTGGCTGGGAAACCTATTATGCCTGGTCGTACAGAGGTGGAACAACTGCATAAGATATACAAACTTTGTGGTTCACCTTCCGATGAGTACTGGAAGAAATCAAAGTTACCTAATGCTACCTTATTTAAACCTAGAGAGCCATATAGGAGATGCATAAGAGAGACATTTAAAGATTTCCCCCCTTCTGCACTACCCCTTATCGACACTCTTCTTGCAGTTGATCCTGCTGAACGGAAGACTGCTTCTGATGCTTTAAGAAGTGAGTTCTTTACGACGGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATATCCCCCAACCAAGGAAATGGATGCTAAACGACGAGATGATGAAGCAAGGAGAGCTATGGCTGCTCCTGAAGCCAATGCTGAGCTTCAACCCAACATTGATAGAAGGCGTCTCATCACTCATGCGAATGCTAAGAGCAAGAGTGAAAAGTTCCCTCCGCCTCATGAAGACGGACAACTTGGATACCCTTTGGGATCTTCAAACCATATTGATCCAGATATTGTGCCAACTGATGTCTCTTTTGTTTCAACCACATACAACTACTCAAAGGAACCATTCCAGGCATGGTCCGGTCCGATCGGCGTGCCAAAGCAGAAGAAACACAATAATGCAGGTGATGCATTGGATTTATCTAAACCACACAAAAGTTCCCACAAGGACAAGGTTAAAGGAAAGAAAATCATAGTTTAG 1248 0.4271 MLTGKIVALKKVRFDNLEPESVKFMAREIIILRRLDHPNVVKLEGLVTSRMSLSLYLVFDYMVHDLAGLAASPEIKFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDDNGVLKIADFGLASFFDPNRRQPMTNRVVTLWYRPLELLLGATEYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYRRCIRETFKDFPPSALPLIDTLLAVDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPTKEMDAKRRDDEARRAMAAPEANAELQPNIDRRRLITHANAKSKSEKFPPPHEDGQLGYPLGSSNHIDPDIVPTDVSFVSTTYNYSKEPFQAWSGPIGVPKQKKHNNAGDALDLSKPHKSSHKDKVKGKKIIV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151036g00058 415 SUPERFAMILY Protein kinase-like (PK-like) 2 272 IPR011009 -
Stsc151036g00058 415 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151036g00058 415 PANTHER CELL DIVISION PROTEIN KINASE 3 269 - -
Stsc151036g00058 415 MobiDBLite consensus disorder prediction 275 310 - -
Stsc151036g00058 415 FunFam Putative serine threonine-protein kinase 25 68 - -
Stsc151036g00058 415 Gene3D Phosphorylase Kinase; domain 1 1 62 - -
Stsc151036g00058 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Stsc151036g00058 415 CDD STKc_CDK9_like 3 265 - -
Stsc151036g00058 415 MobiDBLite consensus disorder prediction 283 300 - -
Stsc151036g00058 415 MobiDBLite consensus disorder prediction 373 415 - -
Stsc151036g00058 415 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151036g00058 415 Gene3D Transferase(Phosphotransferase) domain 1 64 304 - -
Stsc151036g00058 415 FunFam probable serine/threonine-protein kinase At1g54610 64 305 - -
Stsc151036g00058 415 Pfam Protein kinase domain 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151036g00058 415 MobiDBLite consensus disorder prediction 388 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151036g00058 Stsc-Chr151036 399711 404105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151036g00058 3 331 Core Cell Cycle Gene Families AT5G10270 48.127 7.72e-106 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Stsc151036g00058 Pkinase 1.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151036g00058 K08819 - gmx:100817289 708.753