Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151036g00050 ATGGGGTTCGGATTAGATGCTGTGGTTTCAAAATTGCAAAATCTTGCCACTTCTGATCATTCCTCTGTGGTGTCCATGAACATCTTTGTTGCACTTCTATGTGCTTGTATTGTTATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAATCTATCACTGCCCTTTTGATTGGTGTTTGCACTGGTGTGTTCATTTTGCTGGTCAGTGGTGGCACACACTCGCATATTCTTGTCTTCAGTGAAGATCTTTTCTTCATATACCTTCTTCCACCTATAATATTCAATGCTGGGTTTCAAGTGAAAAAGAAGCAGTTCTTTGTTAACTTCATTACCATCATGATGTTTGGTGCTGTTGGTACATTAATATCTTGTACCATCATAACCTTCGGTGTTACACAAATTTTCAAGAGGATGGATATTGGTCCTATGGAAATAGGGGATTATCTAGCAATTGGTGCAATATTTGCAGCAACAGACTCTGTGTGCACATTGCAGGTGCTAAATCAAGATGAGACACCTTTATTGTACAGTCTTGTATTTGGGGAGGGTGTCGTGAATGATGCCACATCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTTAATCAAATTGACCCGTCAATTGCTTTGCAATTTATTGGCAACTTCTTGTATCTGTTTCTCACAAGCACATTACTTGGAGTTGGGGCTGGGCTTCTTAGTGCTTACGTTATAAAGAAACTGTATATTGGCAGACACTCTACTGATCGTGAGGTTGCTCTTATGATGCTCATGGCATACCTCTCCTACATGCTGGCTGAGTTGTGCTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGAATTGTTATGTCTCATTATACTTGGCATAATGTGACAGAGAGCTCAAGAATCACCACCAAGCATGCGTTTGCAACCATATCGTTTGTTGCTGAGATCTTTCTCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGGTTTGTCAGTGATAGACCTGGAACATCAGTAGCAGTGAGTGCAATATTGATGGGTCTAGTACTTGTTGGAAGAGCAGCTTTGGTTTTCCCATTATCGTTCTTATCCAACTTGGCCAAAAAGTCATCAAGCGAGAAAATCTCTTTTAGGCAGCAAGTGATTATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCATATAATCAGTTCACTATGTCCGGCCACACTCAACAGCAATCCAATGCTATCATGATTACCAGCACCATCACAGTTGTGCTTTTCAGCACAGTGGTGTTTGGCTTGATGACTAAACCACTCATAATGATTTTGCTGCCTCCAAACCCTAATAAAGGCACAAGCACCACGAACAGCTCATTGAACACAGAACCACAAAGTCCAAAATCAGTTACTGTCCCACTTCTAGCCCAAGAATCTGAAGCTGATCTTGAAGGCCATGAAGTTGCTCGCCCGAGCAGTATTCGCAACTTGCTAACGAGGCCGACACACACCGTACATAGATTATGGCGCAAGTTCGATGATTCATTCATGCGACCTGTTTTCGGTGGCAGGGGTTTTGTTCCCGTGGAGCCTGGCTCACCAACCGAACGCAATGGCCTTGCATGGCATTGA 1635 0.4281 MGFGLDAVVSKLQNLATSDHSSVVSMNIFVALLCACIVIGHLLEENRWMNESITALLIGVCTGVFILLVSGGTHSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMMFGAVGTLISCTIITFGVTQIFKRMDIGPMEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQIDPSIALQFIGNFLYLFLTSTLLGVGAGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATISFVAEIFLFLYVGMDALDIEKWRFVSDRPGTSVAVSAILMGLVLVGRAALVFPLSFLSNLAKKSSSEKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQQQSNAIMITSTITVVLFSTVVFGLMTKPLIMILLPPNPNKGTSTTNSSLNTEPQSPKSVTVPLLAQESEADLEGHEVARPSSIRNLLTRPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPTERNGLAWH 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151036g00050 544 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc151036g00050 544 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151036g00050 544 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151036g00050 544 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151036g00050 544 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151036g00050 544 NCBIfam sodium/hydrogen exchanger 3 27 451 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc151036g00050 544 Gene3D - 145 197 - -
Stsc151036g00050 544 PANTHER SODIUM/HYDROGEN EXCHANGER 16 522 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151036g00050 Stsc-Chr151036 330827 337266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151036g00050 7 539 Antiporters AT3G05030 75.605 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151036g00050 - - gmx:100816746 892.108