LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151036g00034	ATGGGGCAGTTGAGTGAGGGCCTTACACAAATTCTGATACCTGTGGCAGCATTAATTGGAATTGGATTTGCTTTACTTCAATGGTTCTTGGTCTCAAAGGTCAGAGTATCTGTTGTTGCTGATCGCAATGGCAGAGACAATGGGCACAAAAGCAGCTTATTAGGAGATGCAGAGTTGGAGAATGGTGTTCGGGTTCCTGATGCTATTGCTAAGTGTGCCGAAATTCAGCACGCCATTTCTGTTGGTGCTACCTCGTTTCTCTTTACTGAGTATAGGTACCTGACTATCTTCATGGGAGTATTTGGTGTAATAATTTTTCTGTTTCTGGGCTCTGTGAAGGGCTTTAGTACCAAAAGTGAACCTTGCACTTACAATGAAGGCAATCTTTGTAAACCAGCACTTGCTAATGCTGTGTTTAGCACTATAGCTTTCTTACTTGGTACGCTTACCTCTGTTCTTTCTGGCTTTCTTGGGATGAAGATTGCTACCTATGCCAATGCTAGAACAACTCTTGAAGCAAGAAAGGGAATAGGAAAGGCCTTTGTTACTGCTTTCCGCTCTGGTACGGTGATGGGGTTTCTTCTTGCTGCAAATGGCCTGTTGGTGCTATATGTTGCCATCAATTTATTCAAACTGTATTACGGGGATGATTGGGAAGGACTTTACGAGTCTATCACTGGCTACGGACTTGGTGGTTCATCAATGGCGCTCTTTGGAAGAGTTGGAGGAGGCATATACACCAAAGCAGCTGATGTTGGTGCTGATCTGGTGGGAAAAGTTGAGCAAAATATCCCTGAAGATGATCCACGCAACCCAGCTGTTATTGCTGACAATGTGGGAGACAATGTTGGAGATATAGCAGGTATGGGTTCTGACTTATTTGGGTCCTATGCAGAATCATCCTGTGCAGCTCTATTTGTTGCATCCATATCATCATTTGGACTGAATCATGACTACACGGCGATGTCATATCCTCTCATCATAAGCTCAATGGGAATTGTGGTTTGCTTGATTACGACTCTATTTGCAACTGATGTATTCGAAATAAAATACGAGAACCAAATAGAACCATCCTTGAAACGTCAGCTTCTTATCTCTACCGTATTAATGACTATTGGTATTGCCATAGTCAGCTTCTTTGCTTTGCCATCAGAGTTCACTCTCTATAACTTTGGGGGCAGCAAGGTTGTCAAGAACTGGCACCTTTTCTTCTGTGTTGCCATTGGCTTATGGGCTGGACTTGTAATTGGGTACATTACTGAGTACTTCACTAGCAGTGCTTACAGTCCGGTGCAAGACGTAGCAGATTCCTGCAGGACAGGAGCTGCAACAAATGTTATTTTTGGATTGGCACTGGGATATAAGTCGGTCATTATTCCCATATTTGCTATTGCAGCTGCTATTTATGTAAGCTTCAGCCTTGCCGCCATGTATGGAATTGCTGTTGCGGCACTTGGAATGCTGAGTACTATCGCCACTGGTCTTGCCATTGATGCGTATGGCCCCATTAGTGATAATGCTGGAGGCATTGCAGAAATGGCTGGAATGGGACATGAGATACGAGAAAGAACAGATGCTCTGGATGCTGCAGGAAACACCACAGCTGCCATAGGCAAGGGTTTTGCAATTGGATCAGCTGCACTTGTGTCTCTTGCATTATTTGGTGCTTATGTGAGCAGGGCTGGCATAAAAACAGTGAACGTTCTGACCCCAAAAGTATTTATTGGTTTGATTGTGGGAGCAATGCTTCCTTATTGGTTTTCAGCCATGACAATGAAGAGTGTTGGGAGTGCGGCTCTCAAAATGGTTGAAGAAGTTCGTAGGCAATTCAATACTATTCCCGGTCTTCTAGAAGGGACAGGAAAACCAGATTACGCAAATTGTGTAAAGATTTCCACTGATGCCTCATTGAGGGAGATGATCCCACCCGGAGCACTGGTTTTGCTTACTCCACTTGTTGCTGGAACATTATTCGGAGTAGAAACACTTGCTGGGGTACTTGCTGGCTCTCTTGTTTCGGGTGTGCAGGTGGCAATTTCAGCTTCAAACACTGGTGGGGCATGGGATAATGCTAAGAAATACATCGAGGCTGGTGTTACTGATCATGCTGTGTCGCTGGGGCCAAAGGGCTCTGATGCTCACAAGGCTGCAGTTATAGGCGACACTGTTGGAGACCCTCTCAAAGACACTTCGGGTCCCTCACTCAACATTCTGATAAAGTTAATGGCAGTTGAATCATTGGTATTTGCTCCATTCTTCGCAGCTCATGGAGGCTTAATCTTCAAGTTAATCTGA	2295	0.4458	MGQLSEGLTQILIPVAALIGIGFALLQWFLVSKVRVSVVADRNGRDNGHKSSLLGDAELENGVRVPDAIAKCAEIQHAISVGATSFLFTEYRYLTIFMGVFGVIIFLFLGSVKGFSTKSEPCTYNEGNLCKPALANAVFSTIAFLLGTLTSVLSGFLGMKIATYANARTTLEARKGIGKAFVTAFRSGTVMGFLLAANGLLVLYVAINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEQNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASISSFGLNHDYTAMSYPLIISSMGIVVCLITTLFATDVFEIKYENQIEPSLKRQLLISTVLMTIGIAIVSFFALPSEFTLYNFGGSKVVKNWHLFFCVAIGLWAGLVIGYITEYFTSSAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAAAIYVSFSLAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMGHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAYVSRAGIKTVNVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLLEGTGKPDYANCVKISTDASLREMIPPGALVLLTPLVAGTLFGVETLAGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGVTDHAVSLGPKGSDAHKAAVIGDTVGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKLI	764

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151036g00034	764	PIRSF	H+-PPtase	12	762	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Stsc151036g00034	764	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	5	754	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Stsc151036g00034	764	NCBIfam	V-type H(+)-translocating pyrophosphatase	9	759	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Stsc151036g00034	764	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	7	754	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Stsc151036g00034	764	Pfam	Inorganic H+ pyrophosphatase	64	749	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151036g00034	Stsc-Chr151036	238656	242695	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151036g00034	4	627	Primary Pumps ATPases	AT1G15690	78.571	0.0	1005

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151036g00034	K23025		-	gmx:100812548	1357.43