Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151036g00009 ATGGCAGCAGCATTTCCATTCAGTGTTATATCTATGGTTGAAGATGTTCTTCATAAGTATGGAGATAGATTAAGCGACAACCACTTGGCATCAAGGAAGGCCAAAGAAGCTTCCTCAAGAAGAAAAAAAGCAGTCAAATGGCTGCGAAAGATGGTTGGAACAGTTGGTGGTAAAGAGTTGCCATGTGAGCCTTCTGAAGAAGAATTCATGGCTTCGTTGCGCAACGGGGTCATCCTCTGCAGTGCTCTTAACAAAATCCAACCTGGTGCTGTGCCCAAGGTTGTTGAAAGCCCTAGTGATGCTGATCTTCCTTCTGATGGCATAACACTAACTGTGTATCAGTGCTTTGAAAATATGAAGAACTTTCTTGTTGCTGCTGAGCGATTGGGCCTTCCTACCTTTGAAACTTCTGATTTGGAACCGGGAGGTATATTTTCAAGGGTAGTAGATTGTATTCTAGCAATCAAGGCGTATAGCCAAGGCAATTTGGTTGGCAAAATCAGTTTATGGAGATATGGTAGTGGGAATAATTCAAGATCTTCTAATCATGTTAAAACACCTAAGGAGTCTTTGTCAAGGGCTGCATCTACAGGAGATAGATATAGAGCCAATGGTGATCTCGCCCACGACCACTGCAAAGCGGATTCCATGTCTTCCTTGAGTGCACTAGTTCATGAATTCATTCGCGATAAGAATCAAGAAGAAATCCCCGAATTGATTGAGTCCTTGCTTGGCAAAGTCATGGAGGAGTTTGAACAACGCATGCTTATCCAACAAGAAATGCAGAACAAAATAACTCAAGAAGATAAGCCATCATCTGAAGCGCGTAATTTGGATTTAAAGGCTTCTGATGATGATGAAGAGGAAAAGCAAACATTCCAGCTTCTGAAGCAGCAACAGTTAGTTGAACTGCATAAGGAAAGCATCCAGGAATTGAAAGATATGTTTAATCAAACAAAAACAGGAATGGAATTTCTGAAAAAGAAACACCAGGAGGAGATAATCCATCTAAGTAAGCAGCTGCATAGTGTAGCTTCTGCTGCTTCTGGATATCAGCGAGTCCTCGAAGAAAACCGCAAGTTATACAATCAAGTGCAAGATCTAAAAGGAAATATAAGGGTATACTGCAGAGTTAGGCCTTGCCATCAGAAACAAGGCAGTGTGAGTAAAATAGATGAAGGAAGCATCTCACTCTTAGTACCTTCAAAGAATGGGAAAGATGGGAAGAAGACATTTACTTTCAACAGATGTTTCGGTCCTAATTCGACTCAAGCTGAGGTCTTTGCCGATACTCAGCCTTTGATACGTTCGGTTCTGGATGGCTACAATGTCTGCATATTTGCCTATGGCCAGACAGGTTCAGGAAAAACACACACAATGTCTGGACCAAACAATCCTGATGAGGAAACAGTGGGTGTTAACTACCGTGCGCTTCGAGATCTTTTCCTTATCTCAGAACAAAGGAAAGACACCATTCACTATGAGATCAGAGTTCAGATGCTTGAGATTTATAATGAGACAGTTAGAGACCTTCTATCAGCAGATGATGCAAACCTCGTTCCTGTTCAATCGACTGCAGATGTCTTAAGTCTAATGGACCTGGGATTTAAGAATCGTGCAGTTAGTGCTACTGCAATGAATGATCGCAGTAGTCGTTCTCATAGCTGCCTTACAGTTCATGTTCATGGAAAGGACCTTACATCGGGAAAAACTATTCGCGGTTCTATTCATTTAGTTGACCTGGCCGGAAGCGAAAGGGTTGACAAATCTGAGGTCACAGGAGACAGACTGAAGGAGGCTCAACATATCAACAAGTCACTTGCTGCTTTGGGAGATGTTATATCTTCTCTTGCCCAAAAGCAATCACATGTTCCTTACAGAAACAGCAAACTTACTCAGCTACTTCAAGATTCTCTAGGAGGGCAAGCAAAAACACTAATGTTTGTTCATATAGCTCCGGAGCAAGACGCTGTTGTAGAATCAATTAGTACACTGAAGTTCGCCGAAAGGGTATCCACTATTGAACTTGGTGCTGCCAAAGTTAACAAAGATAGTTCAGATGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCAGCCTTAGCACAGAAGGATGAAGAATCAGAACAGTCTCAGTTTGCTACTCCACTTAGTTCTAAGTCCAGCGGTCGCAAGCTACCAAGAGATGATTCAGTTAGTAGCCTGGAGGTGTAA 2217 0.4217 MAAAFPFSVISMVEDVLHKYGDRLSDNHLASRKAKEASSRRKKAVKWLRKMVGTVGGKELPCEPSEEEFMASLRNGVILCSALNKIQPGAVPKVVESPSDADLPSDGITLTVYQCFENMKNFLVAAERLGLPTFETSDLEPGGIFSRVVDCILAIKAYSQGNLVGKISLWRYGSGNNSRSSNHVKTPKESLSRAASTGDRYRANGDLAHDHCKADSMSSLSALVHEFIRDKNQEEIPELIESLLGKVMEEFEQRMLIQQEMQNKITQEDKPSSEARNLDLKASDDDEEEKQTFQLLKQQQLVELHKESIQELKDMFNQTKTGMEFLKKKHQEEIIHLSKQLHSVASAASGYQRVLEENRKLYNQVQDLKGNIRVYCRVRPCHQKQGSVSKIDEGSISLLVPSKNGKDGKKTFTFNRCFGPNSTQAEVFADTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNNPDEETVGVNYRALRDLFLISEQRKDTIHYEIRVQMLEIYNETVRDLLSADDANLVPVQSTADVLSLMDLGFKNRAVSATAMNDRSSRSHSCLTVHVHGKDLTSGKTIRGSIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLAALGDVISSLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHIAPEQDAVVESISTLKFAERVSTIELGAAKVNKDSSDVKELKEQIASLKAALAQKDEESEQSQFATPLSSKSSGRKLPRDDSVSSLEV 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151036g00009 738 ProSitePatterns Kinesin motor domain signature. 574 585 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc151036g00009 738 CDD CH_AtKIN14-like 40 157 - -
Stsc151036g00009 738 MobiDBLite consensus disorder prediction 703 738 - -
Stsc151036g00009 738 Coils Coil 351 371 - -
Stsc151036g00009 738 ProSiteProfiles Kinesin motor domain profile. 371 674 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151036g00009 738 Pfam Kinesin motor domain 517 674 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151036g00009 738 PRINTS Kinesin heavy chain signature 544 561 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151036g00009 738 PRINTS Kinesin heavy chain signature 624 645 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151036g00009 738 PRINTS Kinesin heavy chain signature 441 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151036g00009 738 PRINTS Kinesin heavy chain signature 575 593 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151036g00009 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 710 IPR027417 -
Stsc151036g00009 738 Coils Coil 681 711 - -
Stsc151036g00009 738 Pfam Calponin homology (CH) domain 39 160 IPR001715 GO:0005515
Stsc151036g00009 738 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 313 515 - -
Stsc151036g00009 738 MobiDBLite consensus disorder prediction 707 723 - -
Stsc151036g00009 738 MobiDBLite consensus disorder prediction 724 738 - -
Stsc151036g00009 738 MobiDBLite consensus disorder prediction 267 286 - -
Stsc151036g00009 738 SMART kinesin_4 369 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151036g00009 738 Gene3D - 30 161 IPR036872 -
Stsc151036g00009 738 Gene3D Kinesin motor domain 366 716 IPR036961 -
Stsc151036g00009 738 PANTHER KINESIN-LIKE PROTEIN KLP-3 45 713 IPR027640 GO:0003777|GO:0007018
Stsc151036g00009 738 SUPERFAMILY Calponin-homology domain, CH-domain 36 179 IPR036872 -
Stsc151036g00009 738 MobiDBLite consensus disorder prediction 176 197 - -
Stsc151036g00009 738 Pfam Microtubule binding 357 512 IPR031852 GO:0008017
Stsc151036g00009 738 ProSiteProfiles Calponin homology (CH) domain profile. 38 160 IPR001715 GO:0005515
Stsc151036g00009 738 MobiDBLite consensus disorder prediction 176 193 - -
Stsc151036g00009 738 SMART ch_5 40 155 IPR001715 GO:0005515
Stsc151036g00009 738 FunFam Kinesin-related protein3 516 716 - -
Stsc151036g00009 738 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151036g00009 Stsc-Chr151036 45817 51002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151036g00009 279 710 Calmodulin-binding Proteins AT5G65930 36.819 1.77e-78 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151036g00009 K10406 - gmx:100808197 877.856