Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151036g00003 ATGGGTCATCTTTCTTCAATGTTGAATGGTTTGGTAAAATCACTAGCAATTAAGAAGAAAGGGAGGAATTCAGAAAGAAGCGGCGGCGGCGGGAGAGAAGCGGCGGAAGCAATGGCGAAGGAAGCAAAAAAGAATGAGTTCTTGTTATGCAGCTCAGGCAGCGTTAATGTTGATGGATCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGCCACAAAGGAGTCAATCAAGATTGCTGCATAGTTTGGGAAGAATTTGGGTGCCAAGAAGACATGATCTTCTGTGGGATCTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCCAAAAGGGTGAGAGAATCAATGGCACCTTGTTTGCTATGCAATTGGCAAGAAACTCTTTCCCAAACTTCACTTGATCTTGACCCAGATTCTGTAGATGTTGATGTTGATGTTGATGTTGAGGCAGAGAAGATGCAAAACTGGTTTGAAATATGGAAGCATTCCTACTTGAAGACTTGTGCTGCCATTGATCGAGAACTCGAACAGAATCGCAAGATCGATTCGTTTTTCAGTGGAACCACTGCCCTCTCCATTGTTAGACAGGGTGAACAAATTGTAATTGCAAATGTTGGTGACTCGCGTGCTGTATTAGCTACAACATCAGATGATGGAAGTTTGGTACCCATTCAGCTCACCGTAGATTTCAAACCCAATTTACCTCAGGAGGCAGAGCGAATTCTAGAGCGTCAAGGCCGAGTGTTCTGCTTAGAAGACGAGCCGGGCGTACACCGGGTGTGGCTGCCGGACGAAGAGTCGCCGGGGCTGGCCATGTCTAGGGCACTTGGTGACTACTGCGTCAAAGAGTATGGCCTAATATCAGTGCCTGAGGTAACCCAATGGAACATAACAACCAGAGACCAATTTGTTGTGCTAGCTACTGATGGGGTGTGGGATGTAATATCGAATGAAGAAGCAGTGGAGATTGTATCTTCAACAGCAGAGAGAGGAAAGTCAGCAAGACGTTTGGTGGAGTGTGCAATGCATTCATGGAAACGCAAGAGGAGAGGCATTGCCATGGATGATATATCTGCCATTTGTCTATTCTTTCATTCTCCTTCTAACCAACTTCCCACCCTTAACTAA 1128 0.4583 MGHLSSMLNGLVKSLAIKKKGRNSERSGGGGREAAEAMAKEAKKNEFLLCSSGSVNVDGSNNFASVFSKRGHKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMAPCLLCNWQETLSQTSLDLDPDSVDVDVDVDVEAEKMQNWFEIWKHSYLKTCAAIDRELEQNRKIDSFFSGTTALSIVRQGEQIVIANVGDSRAVLATTSDDGSLVPIQLTVDFKPNLPQEAERILERQGRVFCLEDEPGVHRVWLPDEESPGLAMSRALGDYCVKEYGLISVPEVTQWNITTRDQFVVLATDGVWDVISNEEAVEIVSSTAERGKSARRLVECAMHSWKRKRRGIAMDDISAICLFFHSPSNQLPTLN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151036g00003 375 CDD PP2Cc 62 364 IPR001932 -
Stsc151036g00003 375 FunFam Probable protein phosphatase 2C 34 54 366 - -
Stsc151036g00003 375 ProSiteProfiles PPM-type phosphatase domain profile. 63 364 IPR001932 -
Stsc151036g00003 375 Pfam Protein phosphatase 2C 87 337 IPR001932 -
Stsc151036g00003 375 Gene3D - 54 366 IPR036457 -
Stsc151036g00003 375 SUPERFAMILY PP2C-like 61 366 IPR036457 -
Stsc151036g00003 375 SMART PP2C_4 54 362 IPR001932 -
Stsc151036g00003 375 PANTHER PROTEIN PHOSPHATASE 41 362 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151036g00003 Stsc-Chr151036 16317 21389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151036g00003 1 365 PP2C-type Phosphatase Gene Family AT3G05640 68.767 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151036g00003 - - gmx:100793051 572.778