Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc14g00016 ATGAAGCTCGAGGAAGATCTCGGCCCAGACCGGGAGGACGACTTCCAAACGGACGACGAAGAAAACCAGGGGAGCAGGGTGTTTGACGATAATTTGGATGATGATTCGGAATCAGATTCTTCAGTTATCTCGCCGAAAATGTCCAATGAAAATATCGTGCCTTCTTGGCCTCAAAGCTATAGGCAATCGATGGACATGTTAACGAGTGTAACACCACCGGGAATTAGTCTCTTAAGGCGAATTGGTTCCAAAGGAAATAGTAATAACCAGTCTTTATCTGGATCATTCAAGAGAACCCAAGAATGGAAGCAAGAGGATTCTCCTTTGGCTAAACCTCTACTTGTCTCTGATAATCTCAAAGAAGTGGAGAGTGCTGTTTCAGAAGAACAACCTTTAACACAATCAAGCGCATTTCCTCATGCCAAGTTTTCTCTTGATGATTTGCCACCACCGCAACACCAATGTTCATTTGCACAGTCAGTTATTAATGGACTTCTTACCATTCCATATGCAATAAAAGAAGGAGGATGGTTGAGTCTTACAATCCTTGTAGTATTTGCTATCATTTGCTGTTACACTGGGATTTTATTGAAGAGATGTTTGGAAAGCAACCCTGGACTCAAGACATATCCAGATATCGGCCAAGCAGCCTTTGGAGTTGCCGGCCGCCTCATCATCGCGGCAGCTTCTGTTGAGTTTATAACACTAATGAGTGATAACCTCTCATCACTGTTTCCTAACGCCCACGTCAAAGTTGGTGGGACTGTTTTGGAAACTCATGTGGTTTTCGCAATCACTGCAGCTCTTCTTGTTCTTCCTACAGTTTGGCTGCGAAATCTAAGCCTTCTTTCTTTTATCTCAGCCGGAGGAATATTTGCAACAATAATGGTGTCATTGTGCTTGTTTTGGGTTGGGTTGTTTGATACAGTTGGACCAAGACCAGGAGGAAAACTTTTAGACCTGGAAAACATTTCTGTATCAGTTGGTCTATATGGTTTTGGCTTTGCTGGTCATGCTGTTTTCCCAAATGTCTACTCTTCTATGCAGGATCCATCCAGATTCCCATCAGTTCTGTATCTTAGTTTTGCCTTTTGTCTTTTTATGTACATAAGTGTGGGCGCAGTTGGGTATTTAACCTTTGGCGACTCAGTTGAGTCTCAATTTACCTTAAACATGCCAAAAGAGCTATTTTCATCAAATATTGCAACCTGGACTACCGTTGTAACACCATTGGCGAAATATGCACTGACGATATTACCCATTGCGTTGAGCATAGAGGAACTTATCCCTAAGAATAAGCTAAGATGCCACACCACAGCCATTGTTATCAGAACATGTTTAGTGATTTCAAGTTTGATTGTGGCCCTCTCTATTCCTTATTTCGGTGCTTTAATGGCGCTAATCGGTGCTTTTATGTCAATGTTTGTTGCACTTATTTATCCTTGTGCGTGTTATCTAAAGCTACACAGTGGTAGATTATCAAAATTGGAGATAACAAATTGTGTATTAATTATTATCGTGGCGGTGATAAGCTCTATCGTTGGAACATATTCTGCTGTTTTAAGAATAGCTACTGATGGGGACTAA 1587 0.414 MKLEEDLGPDREDDFQTDDEENQGSRVFDDNLDDDSESDSSVISPKMSNENIVPSWPQSYRQSMDMLTSVTPPGISLLRRIGSKGNSNNQSLSGSFKRTQEWKQEDSPLAKPLLVSDNLKEVESAVSEEQPLTQSSAFPHAKFSLDDLPPPQHQCSFAQSVINGLLTIPYAIKEGGWLSLTILVVFAIICCYTGILLKRCLESNPGLKTYPDIGQAAFGVAGRLIIAAASVEFITLMSDNLSSLFPNAHVKVGGTVLETHVVFAITAALLVLPTVWLRNLSLLSFISAGGIFATIMVSLCLFWVGLFDTVGPRPGGKLLDLENISVSVGLYGFGFAGHAVFPNVYSSMQDPSRFPSVLYLSFAFCLFMYISVGAVGYLTFGDSVESQFTLNMPKELFSSNIATWTTVVTPLAKYALTILPIALSIEELIPKNKLRCHTTAIVIRTCLVISSLIVALSIPYFGALMALIGAFMSMFVALIYPCACYLKLHSGRLSKLEITNCVLIIIVAVISSIVGTYSAVLRIATDGD 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc14g00016 528 MobiDBLite consensus disorder prediction 82 98 - -
Stsc14g00016 528 MobiDBLite consensus disorder prediction 82 107 - -
Stsc14g00016 528 Pfam Transmembrane amino acid transporter protein 164 518 IPR013057 -
Stsc14g00016 528 MobiDBLite consensus disorder prediction 1 54 - -
Stsc14g00016 528 PANTHER OS05G0424000 PROTEIN-RELATED 155 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc14g00016 Stsc-Chr14 142000 148408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc14g00016 1 526 Amino Acid or Auxin Permease AAAP Family AT5G02180 47.935 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc14g00016 K15015 - zju:107430514 578.941