Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc148g00008 ATGAAGATTTCATCAAAGAGAAAGATCGATGAAGTAAGCATGCCTCTTGAAAATGGATCCAACTTTCTAATTCAACATCACAATTCAATTGAGTACAACATAAGTGAGATTGGTGTGACTTCAATTCTTGTCCTTCAACAAGAAGAGGATATCAAAAAATCAATCTTAAATAAAGTTTCAGCGCAGAAAGACAGAATCAAGAAAGAACTGTATGTGATGATTTTAGAAGGAAAATTAAAAGCCTTAGAGGAAGAGATAGCTACCCTTGTTCAAAAAATTGATGCCCTAAGAAATGAGCATCCTTCATTATTGCTCGAGCAGAATAAACTAAAACTACAAATGGCTATTATTGAAAGGGGGAACACACTACAAGAAGTGGAGATAGAGAAGATTATTGTGGAGAAGATGAAGCAGACTGAACTCCAAAAAGAAGAAGCGATGGAAAACCAGCTAAGGTTGCTGAAAAATATTGGCACTAAAATTGCCAAATGGAGCAGTAGCAGTCTCAGGAACTAA 516 0.3566 MKISSKRKIDEVSMPLENGSNFLIQHHNSIEYNISEIGVTSILVLQQEEDIKKSILNKVSAQKDRIKKELYVMILEGKLKALEEEIATLVQKIDALRNEHPSLLLEQNKLKLQMAIIERGNTLQEVEIEKIIVEKMKQTELQKEEAMENQLRLLKNIGTKIAKWSSSSLRN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc148g00008 171 Coils Coil 136 156 - -
Stsc148g00008 171 Gene3D - 51 101 - -
Stsc148g00008 171 Coils Coil 72 99 - -
Stsc148g00008 171 SUPERFAMILY Leucine zipper domain 51 103 IPR046347 GO:0003700|GO:0006355
Stsc148g00008 171 SMART brlzneu 48 109 IPR004827 GO:0003700|GO:0006355
Stsc148g00008 171 Pfam bZIP transcription factor 52 106 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc148g00008 Stsc-Chr148 71972 81738 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc148g00008 bZIP_1 1.9e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc148g00008 - K11499 aip:110264952 176.407