Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc146g00005 ATGGCTGCTTTTACATCAGTTGCTCTACAAACTTTGGTACCATCTTTGGAAGGAAGCCGTGATCATAGTTCATGGTTGGTGAGAGTGAGATCACACAGATACACAACAGGTCAGAGATTAAACCAGATGAACATTGCAAGGGGATTGACCATTCATTGCGCAGCAACAAAACCAGCAAAATCACCAGCTGAAGAAGACTGGAAGGTTAAGAGAGAAGTTCTGTTAGAAAAAAAGGTAAGAAGTGTTGATGCAAAGGAAGCTCTGCGCCTTCAGAAAGAGAATAAGTTTGTAATTCTTGATGTAAGGCCTGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCCATTAATGTTCAAATATATAGGCTTATAAAAGAGTGGACTGCATGGGACATTGCTAGGCGTGCTGCATTTGCATTTTTTGGCATTTTTTCTGGCACAGAAGAGAACCCTGAGTTCATCAAGACTGTTGAATCGAAATTGAATAAAAATGCGAAGATAATAGTAGCTTGCTCATCAGGGGGTACAATGAAGCCAACACAAAATCTCCCAGAAGGTCAACAATCAAGGTCTCTGATAGCAGCTTACCTGCTGGTCCTTAATGGTTTTACAAATGTCTTCCATCTAGAAGGAGGCCTTTATGCATGGTTTAAAGAGGATCTTCCTACCGTTTCAGGTGAGTGA 684 0.4152 MAAFTSVALQTLVPSLEGSRDHSSWLVRVRSHRYTTGQRLNQMNIARGLTIHCAATKPAKSPAEEDWKVKREVLLEKKVRSVDAKEALRLQKENKFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFIKTVESKLNKNAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGFTNVFHLEGGLYAWFKEDLPTVSGE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc146g00005 227 Pfam Rhodanese-like domain 84 217 IPR001763 -
Stsc146g00005 227 ProSiteProfiles Rhodanese domain profile. 92 225 IPR001763 -
Stsc146g00005 227 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 66 224 - -
Stsc146g00005 227 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 75 225 IPR036873 -
Stsc146g00005 227 CDD RHOD 86 216 - -
Stsc146g00005 227 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 39 225 IPR043186 -
Stsc146g00005 227 Gene3D - 77 225 IPR036873 -
Stsc146g00005 227 SMART rhod_4 82 222 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc146g00005 Stsc-Chr146 26716 31525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc146g00005 1 222 Sulfurtransferasese or Rhodanese AT4G27700 68.142 1.48e-105 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc146g00005 - - gmx:100788147 361.688