Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc145g00008 ATGTTGGAAGGTGGTGCAAAATTCCCTGGACTAATAGATCTCAACAAGCATACAACTGATAACTATTATGATTTCTCTCAAGGCTTTTATCATAAGCTCGGGGAGGGGACCAATATGTCGATTGACAGCATGCAAACAAGCAATGGCGGGGGATCTGTTGCGATGTCCATAGATAATAGCAGTGTTGGGTCCAATGATTCCCATACTCACATATTGAACCACCAGGGGTTGAAGCGGCGTTCAAATGATAACTACTCTGTTCAACACAGTGTAAATCGTCGAGGAAGAGTCACACATGCACTGAGTGATGATGCTTTGGCTCAAGCTCTAATGGATAGCAGTTCCCCAACTGAGGGGCTTGAAAATTTTGATGAGTGGACAATTGATTTGAGGAAGCTTAGTATGGGTGAGGCCTTTGCTCAAGGAGCTTTTGGGAAACTCTATCGGGGAACCTACAATGGTGAGGATGTTGCTATCAAAATCTTGGAGAGGCCTGAAAATGATTTATCAAAGGCTCAGTTGATGGAACAACAGTTTCAGCAGGAGGTTATGATGCTGGCTACACTAAAGCATCCTAATATAGTTCGCTTCATTGGCGCATGCAGAAAACCGATGGTGTGGTGCATTGTAACGGAATATGCCAAAGGAGGTTCCGTTAGACAGTTTCTAATGAAGCGTCATAACCGAACAGTTCCCCTAAAATTGGCTGTCAAACAGGCTTTGGATGTTGCTAGAGGCATGGCATATGTTCATGGACTTGGGTTGATCCACAGGGATTTGAAGTCTGATAATCTTTTGATTTTTGGGGACAAATCAATTAAAATTGCTGACTTTGGAGTTGCACGGATTGAGGTGCAAACTGAAGGGATGACACCTGAGACTGGAACATACCGATGGATGGCTCCGTAA 909 0.4389 MLEGGAKFPGLIDLNKHTTDNYYDFSQGFYHKLGEGTNMSIDSMQTSNGGGSVAMSIDNSSVGSNDSHTHILNHQGLKRRSNDNYSVQHSVNRRGRVTHALSDDALAQALMDSSSPTEGLENFDEWTIDLRKLSMGEAFAQGAFGKLYRGTYNGEDVAIKILERPENDLSKAQLMEQQFQQEVMMLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLMKRHNRTVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc145g00008 302 Gene3D Phosphorylase Kinase; domain 1 124 208 - -
Stsc145g00008 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Stsc145g00008 302 ProSiteProfiles Protein kinase domain profile. 133 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc145g00008 302 SMART serkin_6 133 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc145g00008 302 SUPERFAMILY Protein kinase-like (PK-like) 119 302 IPR011009 -
Stsc145g00008 302 Pfam Protein tyrosine and serine/threonine kinase 134 302 IPR001245 GO:0004672|GO:0006468
Stsc145g00008 302 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 70 302 - -
Stsc145g00008 302 Gene3D Transferase(Phosphotransferase) domain 1 209 302 - -
Stsc145g00008 302 FunFam Serine/threonine-protein kinase isoform 1 123 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc145g00008 Stsc-Chr145 63459 66489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc145g00008 15 302 MAP Kinase Kinase Kinase AT4G31170 76.897 5.14e-160 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc145g00008 PK_Tyr_Ser-Thr 1.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc145g00008 - - qsa:O6P43_003865 561.222