Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc144g00008 ATGTTGTCTTTGAATGTTGTTTCACCCACATCATCCAGTGTCACTTTCACCAAACCCAATCACCAATCTTCCATTAATGCATCCACCATTTTCAAACCAAATCTCCTCAGCAAGGCTCACAGCCACAAGAACCTACCCTGCTTCAGAACCACCACCACCACTTCCCAGCTCCATGAACAAGGCTTCCAAAGTTCCAAGCTTTCTTTCATGCCCACATCTCAGATCCAAGATTCAATTACAAAGTTAGGATCTTTCAACAGGTTCCTCAGACACCCTTTTGAGTCCAAATCAAAACCCATTAACCAAGTTGTGAAAGCAGCTTCTTCTGGTGCCAATCCTGAAGGAGGAGAAGAAAGTAGTGTAGCCCCCAAATCAAAGAACCTAAAGCTTGCACTGGTTTTTGGTCTATGGTACTTCCAAAACATCATCTTCAACATTTACAACAAGAAAGCCTTGAACATTTTCCCATTCCCATGGCTTCTAGCTTCATTCCAGCTTTTTGTTGGTTCCATTTGGATGCTAACTCTATGGACCTTAAAGCTCCAGCCATGTCCAAAAATCTCAAAGCCTTTCATCTTTGCACTTCTTGGACCTGCTTTGTTCCACACAATAGGTCACATCTCAGCTTGTGTTTCATTCTCCAAGGTTGCTGTTTCATTCACTCATGTAATCAAATCAGCAGAACCTGTTTTCTCTGTCATATTCTGTTCTGTCCTTGGTGACAGGTTCCCTATTCAGGTTTGGCTCTCAATTCTACCTATTGTTCTTGGTTGTTCTCTAGCTGCAGTAACTGAAGTGTCTTTCAACTTGCAAGGATTGTGGGGTGCCTNNNNNNNNNNGAGGAATATATATTCTAAGAGAAGTTTGCAGAATTTCAAGGAGGTTGATGGATTGAACTTGTATGGTTGGATTACTATCATTTCATTGTTTTATTTGTTCCCTGTGGCTGTCTTTGTTGAAGGCTCTCACTGGATTCCAGGGTATTATAAGGCTATTGAAGCCATTGGAAAACCATCCACATTTTATATTTGGGTTTTGCTTTCTGGTGTGTTCTACCATCTCTATAACCAATCATCTTACCAAGCCTTGGATGAGATTAGCCCTTTAACTTTTTCGGTTGGGAACACGATGAAGCGAGTCGTGGTGATTGTGTCGTCGGTTTTGGTGTTCAGGAATCCGGTTAGACCACTTAATGGCCTAGGATCTGCCATTGCCATTCTTGGGACTTTCCTGTATTCGCAGGAAACTGCGAAGAAACCGAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 1290 0.4171 MLSLNVVSPTSSSVTFTKPNHQSSINASTIFKPNLLSKAHSHKNLPCFRTTTTTSQLHEQGFQSSKLSFMPTSQIQDSITKLGSFNRFLRHPFESKSKPINQVVKAASSGANPEGGEESSVAPKSKNLKLALVFGLWYFQNIIFNIYNKKALNIFPFPWLLASFQLFVGSIWMLTLWTLKLQPCPKISKPFIFALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFCSVLGDRFPIQVWLSILPIVLGCSLAAVTEVSFNLQGLWGAXXXXRNIYSKRSLQNFKEVDGLNLYGWITIISLFYLFPVAVFVEGSHWIPGYYKAIEAIGKPSTFYIWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQETAKKPKKIEGEKSS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc144g00008 429 SUPERFAMILY Multidrug resistance efflux transporter EmrE 305 414 - -
Stsc144g00008 429 PANTHER SOLUTE CARRIER FAMILY 35 129 415 - -
Stsc144g00008 429 Pfam Triose-phosphate Transporter family 128 413 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc144g00008 Stsc-Chr144 44171 45620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc144g00008 24 427 Antiporters AT5G17630 66.745 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc144g00008 K15283 - gmx:100101869 647.891