Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc141g00013 ATGATGGCCTACACAGGTTCAATGCAATTGCCTCGTGAACTTAGGCTACACAGAAATAGTGGGATCCGTAGTTTCCATAATAATCCGATAGGTGTTGGACGATTACATTTGGTTACCATAAATCTTTCACCACGCAGTTGGAAGCAGAATTCTTCAGCACGCCATCTTTTCGATAGAGTACATGCCCCAATAAGGCATGTGCCTTCCAGATGTAAAGTTTTCATATGTAGATCTGTTCTAATACCAGGTGGAGGGAGTGGGACTTCACTCATGAAATCTGCTGCTGTATTTTTAACAAGCTGGAAGGCCACACAACAGGCTCTTGCCTTCTCTTACTTTGCACTCGGTATCATTGCCTTTGCTGTTTGTGGCCTTGAACCACTCATACGTCTTGGCAGAGTTCTTATTCTTCAAAGAACTGACAGTACTTGGAAGAAAAGCAATTCCAGATATATCATGACATCTTATTTTCAGCCATTGCTATTGTGGACTGGGGCAATGCTCATATGCAGGGCACTAGATCCACTTGTCCTACCATCTGAGTCCAGCCAGGCTGTGAAGCAACGGCTGCTGAATTTTGTGAGATCGTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTTATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGACTCCAGTGATTCAAGAAATGTGGGCTTTGACTTTGCTGGGAAAGCTGTATATACTGCTGTGTGGGTTGCTGCAGTTTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAGGTGGCTAACTGCTGGTGGTCTGGGGACAGTATTGCTCACTCTTGCAGGTCGCGAGATATTCACAAACTTTCTGTCGAGTATAATGATCCATGCTACTCGGCCATTTGTTATGAATGAGTGGATTCAAACAAAGATCGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGATGGTGGTCACCAACAATCGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCCAATCACAAGTTCACTGTAAATGTTGTGAGAAATCTGACTCAGAAATCTCATTGGCGCATCAAGAGTTACATTGCTATAAGTCACTTGGATGTTAACAAAATTAATGTTAGCAATCTTAGTTCCCATCCTATAAACTTGTTCTAG 1155 0.4234 MMAYTGSMQLPRELRLHRNSGIRSFHNNPIGVGRLHLVTINLSPRSWKQNSSARHLFDRVHAPIRHVPSRCKVFICRSVLIPGGGSGTSLMKSAAVFLTSWKATQQALAFSYFALGIIAFAVCGLEPLIRLGRVLILQRTDSTWKKSNSRYIMTSYFQPLLLWTGAMLICRALDPLVLPSESSQAVKQRLLNFVRSLSTVISFAYCLSSFIQQAQKFFMEANDSSDSRNVGFDFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFVMNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAISHLDVNKINVSNLSSHPINLF 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc141g00013 384 Gene3D - 296 351 IPR023408 -
Stsc141g00013 384 SUPERFAMILY Sm-like ribonucleoproteins 280 350 IPR010920 -
Stsc141g00013 384 Gene3D - 194 294 - -
Stsc141g00013 384 Pfam Mechanosensitive ion channel 237 364 IPR006685 GO:0016020|GO:0055085
Stsc141g00013 384 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 2 372 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc141g00013 Stsc-Chr141 69526 73400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc141g00013 1 372 Mechanosensitive Ion Channel Family AT1G58200 60.638 1.60e-163 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc141g00013 K22047 - gmx:100796022 607.831