Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc141g00012 ATGCGGAAGGTTTTGGCCAAAAATCCTCAAGTAGAGCAGCAGAAGTTGCACAGAAGGGTTTTTCTGGAGAATGTCAATCCAGAAAATCAGGCTCTTATGGTATTAATATCTTGCTTTGTGAAAACTTCACATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATTCTCTTGGATCTTCTTAGAGTTGTTTCTCACCATCGAGCTCGGCTAGCCACTCCCATTCGTACAGTTCAGAAAATATACGGTGAGGCTGACTCGGAAAATATACCTTTTGGGGATACTATTTTCACTAGATCCAGAGCAGCGGGAAATCGCCCATACCTTCTTATAGAACCACCATATAAAGTTAATGGTGAGGATAAAGTTAAGCCTTCAGCTCGTTCAACTCGTCCAAATGAGGAAAAAGATGCCAAAGTAGATGAAACCTTGGTGTCTGACCCCAAAGTAGATGAGAATTCAGTGGTGACATCAACCACCTCACCTGGTGTAAATTCCAAGGATAAATCCAAGACAGCTTCTGAAACCCAGAATCAGAATCTGGGCTCTGATGGTTCAGTTGAGAAGAACTCCAAAACCTTGCAGCCCAGAAAGGAAAATGCAAATGCAGGAAAGGGAGCAACAGTTCCCCTATCGAAAAATCTTGCACAAAATGCTGTGCCCGAAACTTCTCCGGTTACTTCGCATGAGTCTAGCAAAGGAGAGACAACTTCTGCTAGTTCTTCACCGTCGAAGCAAGATGAAGATAAATCTGCTGTGTCCTCACCTTCAATTAGGCCTTCCTTGGAAGATAATATCCTTCTTGGTGTTGCTCTCGAAGGTTCAAAACGAACTCTTCCGATTGAGGAAGAAATGACTCCACCTCCTATCCCTGGAGAATCGCAAGAATTTGCTGTCCAAAGGAATGGGAGTGGACCTCTTGCTAACAAGGATAAGAAGGACCCCAAGCAGAATGATTAG 957 0.4357 MRKVLAKNPQVEQQKLHRRVFLENVNPENQALMVLISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYGEADSENIPFGDTIFTRSRAAGNRPYLLIEPPYKVNGEDKVKPSARSTRPNEEKDAKVDETLVSDPKVDENSVVTSTTSPGVNSKDKSKTASETQNQNLGSDGSVEKNSKTLQPRKENANAGKGATVPLSKNLAQNAVPETSPVTSHESSKGETTSASSSPSKQDEDKSAVSSPSIRPSLEDNILLGVALEGSKRTLPIEEEMTPPPIPGESQEFAVQRNGSGPLANKDKKDPKQND 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc141g00012 318 MobiDBLite consensus disorder prediction 210 260 - -
Stsc141g00012 318 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 314 IPR045042 -
Stsc141g00012 318 MobiDBLite consensus disorder prediction 116 147 - -
Stsc141g00012 318 MobiDBLite consensus disorder prediction 116 318 - -
Stsc141g00012 318 MobiDBLite consensus disorder prediction 149 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc141g00012 Stsc-Chr141 68247 69445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc141g00012 1 313 Mechanosensitive Ion Channel Family AT5G10490 48.418 3.32e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc141g00012 K22047 - gmx:100796022 439.499