Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1414g00004 ATGATCACAAGAGATCGCATGGTACTGTCTTGGAAATCACTACCAAAGGCATTTATAACTCCGAAACATAGCGTTCTGAGGCCAGAAGAGAACCAAAAGATAGCATCACAAGCCAGTATGAAAGGCTATCTTGCTGTCTATGTTGGAGAGAACATGAAGCGGTTCGTGATCCCCATTTCGTATTTGAACCAGTCTTTATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTCGGATACGATCATCCAATGACTATTCCATGCAGCGAGGAAGCCTTCTTGGACCTCACTTCTTGCTTCAATGGCCTATAA 312 0.4231 MITRDRMVLSWKSLPKAFITPKHSVLRPEENQKIASQASMKGYLAVYVGENMKRFVIPISYLNQSLFQELLSQAEEEFGYDHPMTIPCSEEAFLDLTSCFNGL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1414g00004 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 36 99 IPR003676 GO:0009733
Stsc1414g00004 103 Pfam Auxin responsive protein 30 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1414g00004 Stsc-Chr1414 14981 15378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1414g00004 41 100 Calmodulin-binding Proteins AT3G43120 54.839 9.06e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1414g00004 K14488 - gmx:100806671 113.62