Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1414g00002 ATGCATGATCTGTTGAGAGAGTTGGGTAGAAGTATTGTTCGAGAAAAATCACCCAAAGAACCAAGAAAGTGGAGCAGGTTATGGAATCAAGAGGATCTAAGCCATGTCTTGCGGGAAAACAAGGTAGCAGAGAATCTTGAAGGCATAGTTTTACCAAGATTTTTTCGAAATAGGAATGATTTGTCAAAAAGGTCAACATTGGGGGTTGAAGCTTTAACGCAAATGAGCCGTATTAAATTACTCATTCTCAGAGGAGTGAATTTCTCAGGATGCCTTGATTCTCTTTCTAATGAGTTGGGATATCTTGATTGGGCAGACTATCCTTTCCACTCTTTGCCATCCAGATTTCAGCCAAATAAACTCGTTAAATTGATGCTACACTATAGCAACATCAAAGAACTTTGGAAAGGAATAAAGGATCTACATAATTTGACACGTATGGAACTATGTTATTCCAAAAATCTTGTGAAGATACCAAATTTATCTCAGACCCCAAATCTTGAGCACCTAGATTTTAAAGGATGCGTTAAACTTGTTCACCTTGATGCATCTATTGGTTCTCTAGAAAAGCTTCGTGATTTGAATCTGGAAAACTGCAAAAATCTTGTCAGTATTCCTAACAGCATATTTCATCTTAATTCACTTGATTATTTAAATCTATCTGGCTGTTGGAAATTACTTAAATATCAGTTGTTAGAGAAACCAAGACAAAGGGAGCAGTTGAATAAAGGTCAAGGTGTAGAAAGGCACATGACATCCTCCATATGCAAAACTCTGACAAGGCCTCTCCATATTTTCTCCTCTAGAAGGCATCCCAATTCAGTTGGTTTGTTGGTTCCTTCTTTATGTCGTTTCCCAGCTTTGGTACATCTTGACATTAGTTTCTGTAATCTACTTCAAATACCTGATGCTATTGGACAGTTACGTTGTTTGGTAAGTTTAAACATAGGGGGAAATCTTTTTGATACGCTACCTGATTGCATCAAGGAACTTCCCAAACTAAGCCGGTTGAATTTGGAGTACTGTAAGCATCTAAAGTGGTTGCCAAGTACCCATTTGCCAATAGGAAGTAGTTATGGAGGAGGAATGTATGTTTTCAACTGCCCCAATTTGAGTGACAAGGAAGGTTGTCGTCTCACAGTTATTTCATGGATGATAAAACGGATTAAGGTGAACAGGCAAAGCTCTTACCCCAGATACACCATTGAAGTTGTTATTCCAGGAAGTAAAATTCCAAGGTGGTTCAGCAAACAAAATACGGGTGATTCAGTGAGGTTGGATCCATCTCCAATTCTGGATGACAATAATTGGATTGGAATTGCTTGTTGTGTAACATTTGTTGTGCATGATACTCCAACTCAATTTCTTGAAGAGATATATTCTCCCTCTCTAGTTAGTTGTGGTTTTCGTCGTAATGGGTATGGGGGCATTTTTTGCGAAGTTCCAATACGTTTTAAGAAGGATTATATCACAACTGAATTAGATCATATGTTGCTAATGTTTTTCTCCCGGGAGGTTTTCATTGATCATTATATACGTGATTTAAATGGAGGAGAATCTGATCTACGTGTTATTGGATTGGTCTTGGCCACTATGATGAGTGATTATCCAGAAGTAGTAAAAGTGAAGAGTTGTGGTTACCGTTGGGTATTTCAGGAAGATTTGGAACAATTTAACCCAACAATGATGTCCACCGCCAATTCTTCAGCTCAGAATCAGAAGCACAAGTTTTTGGCAATTCAAGATCACCAATAG 1755 0.3806 MHDLLRELGRSIVREKSPKEPRKWSRLWNQEDLSHVLRENKVAENLEGIVLPRFFRNRNDLSKRSTLGVEALTQMSRIKLLILRGVNFSGCLDSLSNELGYLDWADYPFHSLPSRFQPNKLVKLMLHYSNIKELWKGIKDLHNLTRMELCYSKNLVKIPNLSQTPNLEHLDFKGCVKLVHLDASIGSLEKLRDLNLENCKNLVSIPNSIFHLNSLDYLNLSGCWKLLKYQLLEKPRQREQLNKGQGVERHMTSSICKTLTRPLHIFSSRRHPNSVGLLVPSLCRFPALVHLDISFCNLLQIPDAIGQLRCLVSLNIGGNLFDTLPDCIKELPKLSRLNLEYCKHLKWLPSTHLPIGSSYGGGMYVFNCPNLSDKEGCRLTVISWMIKRIKVNRQSSYPRYTIEVVIPGSKIPRWFSKQNTGDSVRLDPSPILDDNNWIGIACCVTFVVHDTPTQFLEEIYSPSLVSCGFRRNGYGGIFCEVPIRFKKDYITTELDHMLLMFFSREVFIDHYIRDLNGGESDLRVIGLVLATMMSDYPEVVKVKSCGYRWVFQEDLEQFNPTMMSTANSSAQNQKHKFLAIQDHQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1414g00002 584 Gene3D Ribonuclease Inhibitor 44 249 IPR032675 -
Stsc1414g00002 584 Gene3D Ribonuclease Inhibitor 263 374 IPR032675 -
Stsc1414g00002 584 Pfam Leucine rich repeat 286 342 IPR001611 GO:0005515
Stsc1414g00002 584 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 276 367 IPR044974 GO:0006952
Stsc1414g00002 584 Pfam C-JID domain 406 556 IPR045344 -
Stsc1414g00002 584 SUPERFAMILY L domain-like 1 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1414g00002 Stsc-Chr1414 4414 6565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1414g00002 1 337 WRKY Transcription Factor Family AT4G12020 35.429 6.36e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1414g00002 - - ahf:112789053 756.133