Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1410g00001 ATGGGAAGGTCACCTTGCTGTGAGAAAGCACACACAAACAAAGGTGCATGGACAAAGGAAGAAGATGACAGGCTCATATCTTACATTAGAGCTCATGGTGAGGGTTGCTGGAGATCCCTTCCTAAAGCAGCTGGCCTTCTCCGGTGCGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTCCGCCCTGACCTCAAAAGAGGCAACTTCACTGAAGAAGAAGATGAACTCATCATCAAACTCCACAGTCTCCTTGGCAACAAGTGGTCCCTTATAGCTGGAAGATTGCCAGGGAGAACAGACAATGAGATTAAGAACTATTGGAACACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATCGACCCTGCTACTCATAGGCCTCTCAATGATTCTACTTCTGCTTCTCATAATCAAGAACAACAACAACAACCATCTTCTCTTGTTGCAGCAACAGCAACAACCACCACCATATCTTTTGCTTCTTCTGTTTCTGCTTCTGCTTCTGCTGCTGTTAAACAAGAGCAAGATACTCTTACTACTACTAGTGCTACTTGCAACGCAAACATGTTTGTTGGGATTATGGAGAAGAAGAACATCTCAATGGAAAGGTGCCCTGACTTGAATCTTGAGTTGACAATTAGTCCTCCACGCCATGTGGATGAACCTGATCACCACAAATTCAGTGGAATAGAGAGAAGCCTCTGCTTTGTTTGCAGTTTGGGTTTGCAAAACAGCAAGGATTGCAAGTGTGGATACGCCACCGTTAATGCTAATAATGTTAATGGTAGCACTAATAGTAATGGCAACACCACCACCACCGCTTCTGGTGGTGCTGGCTATGATTTCTTGGGCTTGAAACCAGGTAGTGTTTGGGATTACAGAAGCTTGGAAATGAAGTGA 903 0.4529 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNDSTSASHNQEQQQQPSSLVAATATTTTISFASSVSASASAAVKQEQDTLTTTSATCNANMFVGIMEKKNISMERCPDLNLELTISPPRHVDEPDHHKFSGIERSLCFVCSLGLQNSKDCKCGYATVNANNVNGSTNSNGNTTTTASGGAGYDFLGLKPGSVWDYRSLEMK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1410g00001 300 FunFam Myb transcription factor 68 137 - -
Stsc1410g00001 300 MobiDBLite consensus disorder prediction 127 149 - -
Stsc1410g00001 300 CDD SANT 69 112 IPR001005 -
Stsc1410g00001 300 FunFam MYB-related transcription factor 13 66 - -
Stsc1410g00001 300 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 181 - -
Stsc1410g00001 300 CDD SANT 16 61 IPR001005 -
Stsc1410g00001 300 SMART sant 66 114 IPR001005 -
Stsc1410g00001 300 SMART sant 13 63 IPR001005 -
Stsc1410g00001 300 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Stsc1410g00001 300 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Stsc1410g00001 300 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Stsc1410g00001 300 Gene3D - 14 66 - -
Stsc1410g00001 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Stsc1410g00001 300 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Stsc1410g00001 300 Gene3D - 69 148 - -
Stsc1410g00001 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Stsc1410g00001 300 MobiDBLite consensus disorder prediction 123 149 - -
Stsc1410g00001 300 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1410g00001 Stsc-Chr1410 2296 4042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1410g00001 1 300 MYB Transcription Factor Family AT4G38620 57.895 2.94e-116 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Stsc1410g00001 Myb_DNA-binding 2.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1410g00001 K09422 - zju:107404478 363.999