Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1400g00004 GATTGCTATCTAAACGGTTACCATGTCTCGAAGGGAACTCGCTTGTTCATCAATCTATGGAAGCTCCATAGGGATCCCAAAACATGGTCTAATCCTAATGATTTTGAGCCTGAGAGGTTCCTTAACGCTTGTTCCGGGATCGATTTGCGCGGTCAGGACTTCGAGTTTCTCCCGTTTAGCTCAGGACGAAGGTCGTGCCCCGGCATGACGTTTGGAATGCAAGTTGTGCATCTGACATTGGCGAGGTTGATTCAAGGTTTTGATATGTCAACAAAGGATGGTGGTGAAGTTGATATGAGTGAAGGGTTGGGTGTGGCCTTGCCTAAGAAAAATGCACTTGATATTCTTCTCAAACCTCGTCTTCCTTTGGAGCTATATGAAAACCTTTGA 390 0.4564 DCYLNGYHVSKGTRLFINLWKLHRDPKTWSNPNDFEPERFLNACSGIDLRGQDFEFLPFSSGRRSCPGMTFGMQVVHLTLARLIQGFDMSTKDGGEVDMSEGLGVALPKKNALDILLKPRLPLELYENL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1400g00004 129 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 59 68 IPR017972 GO:0005506|GO:0016705
Stsc1400g00004 129 Pfam Cytochrome P450 1 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1400g00004 129 SUPERFAMILY Cytochrome P450 1 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1400g00004 129 PANTHER CYTOCHROME P450 82C3-RELATED 1 126 - -
Stsc1400g00004 129 PRINTS E-class P450 group I signature 66 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1400g00004 129 PRINTS E-class P450 group I signature 18 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1400g00004 129 PRINTS E-class P450 group I signature 56 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1400g00004 129 Gene3D Cytochrome P450 1 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1400g00004 Stsc-Chr1400 15393 15809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1400g00004 1 126 Cytochrome P450 AT4G31970 50.394 1.41e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1400g00004 K17961 - gmx:100791088 196.438