Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc13g00024 ATGGCAAAGGCAAAATACTACAACTCTTGCCCTTCAAGAAAATGCTGGTCCTTCGGACTTGGCTCAAAATATGAACAGTCCCTGAATGTAGGGGAAAGAGTGGTGTGCTCTACTGCTCTCACTGCAGCAGCACCAACGAATGATGCTGAGCTCATTGAAGGAATCATCAAATCAGTGAATACTAGGTTGAAACTTTTGGGCCAAGTTCACTCCAAAGGACTTCTTGGAATTGGCAAATCAATTGCTCGCGTTGAATCGTTACTCCGCCAAGATCCACAAAGCGTTCGAGTCATCGGAATCTGGGGAATAGGTGGCATAGGGAAGACGACAATCGCAGAACAAGTCTATAACCTTCTCCGTGATGAATACGAAGCCACTGTTTTTCTGCGTAACGTAAGGGAAGTATCTCTCAGAAATGGAATCATCAACTTGAAGAACGAACTCTTCTCCAAACTCTTAGGCGAAGATCCCAAAATTGACATGCAAAATGGATTGCCTACTTATGTTGAGAAGAGAATTGGGCGAATGAAGGTTCTTATTGTTCTTGATGATGTCAGTGAATCAGAGCAGTTCGAGATTCTACTTGGATCGCCTGGATTTTACGGATCGGGAAGTAGAATTGTTGTAACTACAAGAGATAGACAAGTTCTTGCGAAATACGCTCATGTTAATGATACATACAAGGTTGAACCGTTGGAATTTGATGAAGCACTTCAGCTTTTCAATTCCATTGCTCTTCAAGAGAATCAAAGCGAAGAGGAGTATATTGTGCTTGCAAAGAGGGTGGTGGATCATGCCAAAGGAATCCCTGTTGTTCTTAAGACTCTGGCTCATCTGCTTCATGGAAAAGAGAAGGGGATTTGGGAAAGTGAGTTGGAGAAGCTTGGCAAGATTCCGAATAAGAAGGTTTTTGATATGATGAGGCTGAGTTATGATGACTTGGATAATGATCAGAAATCAATACTTTTGGACATTGCATGCTTCTTTGATGGGATGAAGATGAAGGATAAATACTTAGAGAGTTTGTTAAAGCATGGAGATTCACCGGTTCTTTCAGCACTGAAAAGGCTTGAAGATATATCTTTCATAACCATTTCTAAAGAGGATGAAGTAACAATGCATGACATTGTTCAAGAAATGGCTTGGGAGATTGTTCGCCACGAATCTATTGAAGACCCTGCCAACCATAGTCGAATATGGAATCCAGATGACATCTACCAAGTATTGAAAAATAATCAGGGGAGTGAGGCCATTAGAAGCATAAACTTTAGCTATTCCAAAGCAACACTTAGGGGCATGCACTTAAGCCCTCTTGTATTTTCTAAGATGAGTAAGCTGCGATTTCTTGATTTTTATGGAGAGCAAGACCTCTTAAGCTTTCCTGAGGGGCTTCAACAGTTGCCGAGTCGACTAAGATATCTTCGTTGGACTTATTACCCTCTAAATTCATTACCAAAGAAATTTTCTGCAGAGAAGCTAGTCATATTGGAATTACCTTATAGTAAAGTGGAAAAGCTTTGGTATGGGATCCAGAATCTTGAGAAATTGAGGGTCCTTAAGGCTCCATATTCCTCACAGTTGAAGGAGTTTCCAGACTTATCAAGGGCCATCAATCTTGAGATATTGGATCTCAAATATTGTCTTTGGTTGACTCGTGTCCATCCATCTGTCTTCTCCCTCAACAAGCTTGAGACTTTGGATCTAAGCTGGTGCTCTGCACTTACCAGACTTGAAACCAATGCTCACTTGACATCCCTTCGTTATCTGAGCCTCTATCACTGCAAAAGATTGAACAGATTCTCAGTGATATCAGAAAACATGACAGAGCTCGATTTGAGACACACATTGATCCGAGACTTGCCCTTGTCCTTTGGATGTCAAAGCAAACTCGAAAAGCTTCATCTAGCAAACTCTGAAATAAAGAGGATGCCTGATAACATCAAGCTTCTCACTAGTCTGAAATATCTTGACATAAGTGATTGCAAGAATCTTCAAACTCTACCAGAGCTTCCACTCTCCATAGAAACATTAGATGCAGAAAACTGCACATCATTGAAGGCTGTGTTTTTCCCAAATGTCAGCCAACAGCTGAAGGAAAACAAGACAAGGGTTGTGTTCTGGAACTGCTTGAAGTTAGAAAAGCAATTTCTGAAAGCTATGGCATTGAATGCTCATATCAACATGGTGAGGTTTTCAAACCAATATCTGTCTGCGCTAGAACATGATAATGTAGACAATTCTAATGAAGACCCTGAAGCCTCTTATGTTTATCCGGGGAGCAATGTTCCAAATTGGTTTGAGTACCAAACAACAACGGATCAACTAACTGTTAATCTCTCTTCTGCTCCATATGCACCCAAATTGGGCTTTATTTTATGCTTCATTGTTCCTGCATTACCATATGAGGGTTTAAGGTTGATGGTTACAATCAGTGGTGACGAAGAAGATGATGGCAGCGAGGTCATGACGCTGAACTTGGACAGACCAAGGAAGGAGATTTTATCGGATCATGTGACTCTAATCTACGACCAACGATGTACTAGCTTCCTCAATAGCAGAGGACAACATCGAAGAATGTTCAAAATCAAGGTGTCAGTTGTGTCAGTATCCATGGCATCAGAGTATGTGGCAGTTGAGTTGAAAGGGTTTGGAGTGCACCAAGTAAACCCATTAGAGTATCCAAGTTTCATTAGTTTTATTAGAAGAATGGAATTGTTGGGTTATCATACTCCTGCTGCTGCTGTGAACCCGGTTTCAATGTGGAATGGAATTTGGTGGTGGAACAATTGA 2790 0.4111 MAKAKYYNSCPSRKCWSFGLGSKYEQSLNVGERVVCSTALTAAAPTNDAELIEGIIKSVNTRLKLLGQVHSKGLLGIGKSIARVESLLRQDPQSVRVIGIWGIGGIGKTTIAEQVYNLLRDEYEATVFLRNVREVSLRNGIINLKNELFSKLLGEDPKIDMQNGLPTYVEKRIGRMKVLIVLDDVSESEQFEILLGSPGFYGSGSRIVVTTRDRQVLAKYAHVNDTYKVEPLEFDEALQLFNSIALQENQSEEEYIVLAKRVVDHAKGIPVVLKTLAHLLHGKEKGIWESELEKLGKIPNKKVFDMMRLSYDDLDNDQKSILLDIACFFDGMKMKDKYLESLLKHGDSPVLSALKRLEDISFITISKEDEVTMHDIVQEMAWEIVRHESIEDPANHSRIWNPDDIYQVLKNNQGSEAIRSINFSYSKATLRGMHLSPLVFSKMSKLRFLDFYGEQDLLSFPEGLQQLPSRLRYLRWTYYPLNSLPKKFSAEKLVILELPYSKVEKLWYGIQNLEKLRVLKAPYSSQLKEFPDLSRAINLEILDLKYCLWLTRVHPSVFSLNKLETLDLSWCSALTRLETNAHLTSLRYLSLYHCKRLNRFSVISENMTELDLRHTLIRDLPLSFGCQSKLEKLHLANSEIKRMPDNIKLLTSLKYLDISDCKNLQTLPELPLSIETLDAENCTSLKAVFFPNVSQQLKENKTRVVFWNCLKLEKQFLKAMALNAHINMVRFSNQYLSALEHDNVDNSNEDPEASYVYPGSNVPNWFEYQTTTDQLTVNLSSAPYAPKLGFILCFIVPALPYEGLRLMVTISGDEEDDGSEVMTLNLDRPRKEILSDHVTLIYDQRCTSFLNSRGQHRRMFKIKVSVVSVSMASEYVAVELKGFGVHQVNPLEYPSFISFIRRMELLGYHTPAAAVNPVSMWNGIWWWNN 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc13g00024 929 Gene3D Ribonuclease Inhibitor 404 579 IPR032675 -
Stsc13g00024 929 SUPERFAMILY "Winged helix" DNA-binding domain 301 410 IPR036390 -
Stsc13g00024 929 Gene3D - 71 226 IPR027417 -
Stsc13g00024 929 Gene3D Ribonuclease Inhibitor 580 721 IPR032675 -
Stsc13g00024 929 Pfam C-JID domain 757 868 IPR045344 -
Stsc13g00024 929 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 600 IPR044974 GO:0006952
Stsc13g00024 929 Pfam NB-ARC domain 85 296 IPR002182 GO:0043531
Stsc13g00024 929 SUPERFAMILY L domain-like 434 725 - -
Stsc13g00024 929 Pfam Leucine Rich Repeat 492 511 IPR011713 -
Stsc13g00024 929 PRINTS Disease resistance protein signature 97 112 - -
Stsc13g00024 929 PRINTS Disease resistance protein signature 266 280 - -
Stsc13g00024 929 PRINTS Disease resistance protein signature 558 574 - -
Stsc13g00024 929 PRINTS Disease resistance protein signature 172 186 - -
Stsc13g00024 929 Gene3D - 232 315 IPR042197 -
Stsc13g00024 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc13g00024 Stsc-Chr13 113390 117852 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc13g00024 47 669 WRKY Transcription Factor Family AT4G12020 35.312 9.64e-94 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc13g00024 - - adu:107464771 1448.72