Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc13g00017 ATGTTAGAGATGCAAAATGGATTGCCTACTGAAGTTGAGAAGGCAATTGGTCGTATGAAGGTTCTTATTGATGTTAATGAATCAGAGCAATTGGAAATGTTAGTCGGAAATCTTCAATGGTTTGGATCAGGTAGTAAAATTATTATAACCACGAGAGATAGGCAAGTGCTTGCAAAATATGTTCCTACAAATGCTTCATACAAGGTTGAACCATTGGACTCTAGTGAAGCACTTCAGCTTTTCAATTCGATTGCATTTCAACAAAATCAAGTTGGAAAGGAGTACAGTGTGCTGGCAGAGAGGGTGGTCCATTATGCCAAAGGCATTCCACTAGTTCTTAAGGTTTTGGCTCGTCTACTTCATGGACACGATAAGTGGTTTTGGGAAAGCACATTTGAGAAACTTGGGAAGATACCAAATAAGGGGGATTCTGATAGGCTGAAGCTGGGATATGATGACTTAGATCACCAGGAGAAATTAATATTTTTAGACATTGCATGCTTTTTTTATGGAATGATGTTGGAAGTGAAATACTTGAAAAGTTTATTGAAAGATGGCAGCATTAGGAAGACTTGA 576 0.3802 MLEMQNGLPTEVEKAIGRMKVLIDVNESEQLEMLVGNLQWFGSGSKIIITTRDRQVLAKYVPTNASYKVEPLDSSEALQLFNSIAFQQNQVGKEYSVLAERVVHYAKGIPLVLKVLARLLHGHDKWFWESTFEKLGKIPNKGDSDRLKLGYDDLDHQEKLIFLDIACFFYGMMLEVKYLKSLLKDGSIRKT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc13g00017 191 Gene3D - 72 155 IPR042197 -
Stsc13g00017 191 Gene3D - 7 70 IPR027417 -
Stsc13g00017 191 Pfam NB-ARC domain 21 131 IPR002182 GO:0043531
Stsc13g00017 191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 165 IPR027417 -
Stsc13g00017 191 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 179 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc13g00017 Stsc-Chr13 83191 83766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc13g00017 21 184 WRKY Transcription Factor Family AT5G45050 38.182 6.03e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc13g00017 - - adu:107464771 254.218