Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc13g00015 ATGGTTTCCTCCAGCGGAAAGCCGCATGATCATTGCAAAGGGAGTGCTGACACAACCGAAGTTGTGAGTGAAAGGCAGGAGGATGTTGATGATGAAGAGGAAAAATGCTTAGACATGGCGAGTGAAGCCGATGACTTTGACAGAGACAATGTTGACAAGGGTGTAGGGTTGGCCAATGGCTTTGTAGAGTTTGAGGTCCTTCGAGCTGAGGATGTGCTACATATGGAGTTTAACAATCCGCAGGAAGCTAGTCACTTCTATAATGAGTATGGGCGGGCTAAGGGTTTTTCTATTAGGCAGGGAAAGAAGTTGAAAAACAGTAAAGGGGAATTTATTCAATACACCTATCTGTGCAACAGACAAGGATTTAGAGACAAGAAGTGGTTGGAGAAAAGTGATCGCAAGAGGGTGCACAAGGTTGTAACCCGTTGCGGCTGTCTTGCCGAAATGAGGATTAAGAGGAGAGCTGGAAGTGGGAAATGGTATGTGTCGCGCTTTGTTGATGAACATAACCATGGGGATGTTCCGGCAAGATACCCACTGGGACTGGAAAGAGTTGTCAATCAAACCGGCGACATGCCATTGGGATCGGAAGGAGTCGTCAATCATACTGGCGACATGCTGTTGGGACCGGAAAGAGCTGTCAATCTAACTAGCGACGTGACCGAGTTGTACAAAACCAGAGAAACATGCTCGGACATGGTGATTGAAGCCAATGATTTCGACAGGGACAATATTGACAAGTGTGTAGGGTTGACAGATGGGATTGTAGAGTCTGAAGTCCTTCGAGCAGAGGATGCACTACAGATGGAGTTCAACAATCCGCAGGAAGCTAGTCACTTCTATAACGAGTATGGGCGAGCTAAGGGTTTTACTGTAAGGGAGGGAAAGAAGGTAAAAAACAGTAAAGGGGAAGTTGTTCGATACACCTATCTCTGCAATAGAGAAGGATTTAGAGACAAAAGGTGGTTGGAGAAAAGTGATCGCAAGAGGGAGCACAGGGCTCAAACCCGTTGCGGCTGTCTTGCCGAAATGAGGATTAAGAGAAAAGCTGGAAGTGGGAAATGGTATGTGTCGCGCTTTGTTGAGGAACATAACCATGAGGTTCTTTCGGCAAGGTACCTGTTGGGACCAGAAAGAGTTGTCAATCAAACTAGTGACGTGACAGAGTTGTACAGAACCAGAGTGGATGCATTTGTGCAACTGTGTAAGCGTTTAGCAAAGGCAGCTTGCTTGACGGATGAGGACTACAAGTTGTATACCGATAAGGTTTTGAGGGATGCAATTTTTTTAGAAATGAAGAACGGGTCGGGTGTTGAGGTTGTAAGAGGAAATAATGCCAATGCTGAGTTAGTAAAGGATCCAGGGACAAAGGGAACAGGCCGTGCAAGTGAAGTGTCTGCTTCAAAGGGAACAAAGAGACGCAAGTGCAGCACCTGGGGCCGTCTCGGGCATCGCAGGACTAGGTATCTGAATGGGATGCCATCAGCTGCATTGCCTGCTGAAGATGCTGTACGAGACAGCACTGGTCTCATGCTCCAAAATGGAGAGATGGGTCAGCAAGAATTTGTGAAGCGGAGAAGAACAGTTGACCTTCTGGCGTCGTTTCCCAAGTTTCTGTGA 1623 0.4701 MVSSSGKPHDHCKGSADTTEVVSERQEDVDDEEEKCLDMASEADDFDRDNVDKGVGLANGFVEFEVLRAEDVLHMEFNNPQEASHFYNEYGRAKGFSIRQGKKLKNSKGEFIQYTYLCNRQGFRDKKWLEKSDRKRVHKVVTRCGCLAEMRIKRRAGSGKWYVSRFVDEHNHGDVPARYPLGLERVVNQTGDMPLGSEGVVNHTGDMLLGPERAVNLTSDVTELYKTRETCSDMVIEANDFDRDNIDKCVGLTDGIVESEVLRAEDALQMEFNNPQEASHFYNEYGRAKGFTVREGKKVKNSKGEVVRYTYLCNREGFRDKRWLEKSDRKREHRAQTRCGCLAEMRIKRKAGSGKWYVSRFVEEHNHEVLSARYLLGPERVVNQTSDVTELYRTRVDAFVQLCKRLAKAACLTDEDYKLYTDKVLRDAIFLEMKNGSGVEVVRGNNANAELVKDPGTKGTGRASEVSASKGTKRRKCSTWGRLGHRRTRYLNGMPSAALPAEDAVRDSTGLMLQNGEMGQQEFVKRRRTVDLLASFPKFL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc13g00015 540 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 245 394 - -
Stsc13g00015 540 Pfam FAR1 DNA-binding domain 85 172 IPR004330 -
Stsc13g00015 540 Pfam FAR1 DNA-binding domain 280 370 IPR004330 -
Stsc13g00015 540 MobiDBLite consensus disorder prediction 1 33 - -
Stsc13g00015 540 MobiDBLite consensus disorder prediction 453 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc13g00015 Stsc-Chr13 74577 79085 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc13g00015 FAR1 7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc13g00015 - - adu:107464780 785.793