Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc13g00014 ATGGCGAGTGAAGCCGATGACTTTGACAGAGACAATGTTGACAAGGGTGTAGGGTTGGCCAATGGCTTTGTAGAGTTTGAGGTCCTTCGAGCTGAGGATGTGCTACATATGGAGTTTAACAATCCGCAGGAAGCTAGTCACTTCTATAATGAGTATGGGCGGGCTAAGGGTTTTTCTATTAGGCAGGGAAAGAAGTTGAAAAACAGTAAAGGGGAATTTATTCAATACACCTATCTGTGCAACAGACAAGGATTTAGAGACAAGAAGTGGTTGGAGAAAAGTGATCGCAAGAGGGTGCACAAGGTTGTAACCCGTTGCGGCTGTCTTGCCGAAATGAGGATTAAGAGGAGAGCTGGAAGTGGGAAATGGTATGTGTCGCGCTTTGTTGATGAACATAACCATGGGGATGTTCCGGCAAGATACCCACTGGGACTGGAAAGAGTTGTCAATCAAACCGGCGACATGCCATTGGGATCGGAAGGAGTCGTCAATCATACTGGCGACATGCTGTTGGGACCGGAAAGAGCTGTCAATCTAACTAGCGACGTGACCGAGTTGTACAAAACCAGAGAAACATGCTCGGACATGGTGATTGAAGCCAATGATTTCGACAGGGACAATATTGACAAGTGTGTAGGGTTGACAGATGGGATTGTAGAGTCTGAAGTCCTTCGAGCAGAGGATGCACTACAGATGGAGTTCAACAATCCGCAGGAAGCTAGTCACTTCTATAACGAGTATGGGCGAGCTAAGGGTTTTACTGTAAGGGAGGGAAAGAAGGTAAAAAACAGTAAAGGGGAAGTTGTTCGATACACCTATCTCTGCAATAGAGAAGGATTTAGAGACAAAAGGTGGTTGGAGAAAAGTGATCGCAAGAGGGAGCACAGGGCTCAAACCCGTTGCGGCTGTCTTGCCGAAATGAGGATTAAGAGAAAAGCTGGAAGTGGGAAATGGTATGTGTCGCGCTTTGTTGAGGAACATAACCATGAGGTTCTTTCGGCAAGGTACCTGTTGGGACCAGAAAGAGTTGTCAATCAAACTAGTGACGTGACAGAGTTGTACAGAACCAGAGTGGATGCATTTGTGCAACTGTGTAAGCGTTTAGCAAAGGCAGCTTGCTTGACGGATGAGGACTACAAGTTGTATACCGATAAGGTTTTGAGGGATGCAATTTTTTTAGAAATGAAGAACGGGTCGGGTGTTGAGGTTGTAAGAGGAAATAATGCCAATGCTGAGTTAGTAAAGGATCCAGGGACAAAGGGAACAGGCCGTGCAAGTGAAGTGTCTGCTTCAAAGGGAACAAAGAGACGCAAGTGCAGCACCTGGGGCCGTCTCGGGCATCGCAGGACTAGGTATCTGAATGGGATGCCATCAGCTGCATTGCCTGCTGAAGATGCTGTACGAGACAGCACTGGTCTCATGCTCCAAAATGGAGAGATGGGTCAGCAAGAATTTGTGAAGCGGAGAAGAACAGTTGACCTTCTGGCGTCGTTTCCCAAGTTTCTGTGA 1509 0.4698 MASEADDFDRDNVDKGVGLANGFVEFEVLRAEDVLHMEFNNPQEASHFYNEYGRAKGFSIRQGKKLKNSKGEFIQYTYLCNRQGFRDKKWLEKSDRKRVHKVVTRCGCLAEMRIKRRAGSGKWYVSRFVDEHNHGDVPARYPLGLERVVNQTGDMPLGSEGVVNHTGDMLLGPERAVNLTSDVTELYKTRETCSDMVIEANDFDRDNIDKCVGLTDGIVESEVLRAEDALQMEFNNPQEASHFYNEYGRAKGFTVREGKKVKNSKGEVVRYTYLCNREGFRDKRWLEKSDRKREHRAQTRCGCLAEMRIKRKAGSGKWYVSRFVEEHNHEVLSARYLLGPERVVNQTSDVTELYRTRVDAFVQLCKRLAKAACLTDEDYKLYTDKVLRDAIFLEMKNGSGVEVVRGNNANAELVKDPGTKGTGRASEVSASKGTKRRKCSTWGRLGHRRTRYLNGMPSAALPAEDAVRDSTGLMLQNGEMGQQEFVKRRRTVDLLASFPKFL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc13g00014 502 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 221 345 - -
Stsc13g00014 502 Pfam FAR1 DNA-binding domain 242 332 IPR004330 -
Stsc13g00014 502 Pfam FAR1 DNA-binding domain 47 134 IPR004330 -
Stsc13g00014 502 MobiDBLite consensus disorder prediction 415 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc13g00014 Stsc-Chr13 74577 79085 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc13g00014 FAR1 6.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc13g00014 - - adu:107464780 728.398