Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1399g00002 ATGGCAAATCTCAATCTTGTTGTGTGTAGTGTGATGATCACCATCTTAGTATTCACGCTTTTCACTACTTGTGATGCTAATAACAATAACGATGATAATCCAAAACTTCATATTGTTTATATGGGCTCTTTACCTGAAACAACAAATTCCTACTCTCCAACTTCTCACCATCTCAACTTGCTGCAACAAGTTCTTGATGGTAGCAGCAACCCGGCAAATTCCTTAGTCCGTAGCTACAAAAGGAGTTTCAATGGCTTTGCTGCTATGCTCACGAATGAGCAAGCCGCAAAGTTAGCAGAAATGGAAGAGGTTGTGTCGGTTTTTCCAAGCATGACATTCCAAACCCAAACAACAAGATCATGGGATTTCTTAGGATTTCCAAAGGCAGTAAAAAGACAACCCAAAAGCATCGAAAGCAACCTCGTTGTGGGAGTTATCGACACCGGAATTTGGCCTGAATCAGAAAGCTTCAATGACAAAGATTTCACCGGCCCTATTCCAAAGAAGTGGAAGGGTACTTGTGCCGGTGGCAAGAACTTCACATGCAACAAGAAGCTAATTGGAGCAAGATTCTACGTAGATGACTCTGCAAGAGATGGTTTAGGCCATGGAAGCCATACAGCATCAACAGCAGCAGGAAACTATGTTGATAATGTTGGCTTCTTTGGCATTGCACAAGGCACTGCAAGAGGAGCAGTTCCTTCTGCAAGAATTGCTGCTTATAAAATATGCAATGCTCAAGGCTGTGCTGGTGCTAGCATCTTAGCTGCCTATGATGATGCAATTGCTGATGGAGTTGACATAATTTCCATTTCAGTTGGTTACAAATTCGCAGTGAGGCTAGAAATTGATCCTAATGCCATTGGTTCCTTTCATGCTATGGCCAAAGGGATACTTGTATCCCAGTCAGCTGGTAATTCCGGTGCGTTACCTTCCTCTGTAGCAAGCATAGCGCCATGGTTGATAAGTGTAGCAGCAAACACTATAGACCGCCGGATCGTCGACAAGGTGGTTCTTGGCAACGGAAAAGTGTTTATCGGGAACACGATTAATCCTTTCGAGTCGAACCGAAGGAAAATTCCTATAGCATTGAGCAACGGCAATTCAGGTGATTGTCCAAAAGAATATGCAGACCGTTGTCTATGCTTGGATAAAAAACTGGTGAATGGAAAGATAGTTTTATGTGACCAGTATAGCGATGATGTACTCAAAGTTTCTGGTGCAGCTGGTGGAGTTGTAAATGTTGATACTGGTAATGTGGGTTACGTATCATTATTGCCATTCGCGCCATTGCTACCACAAGACTATGAATTGATTAAATCCTACAGAAACTCAACGAAAGATCCAAGAGCTGAGATTCTCAAGAGTGAGAGTGCCAGAGATCGCAATGCTCCTAAAGTGGCAATATTTTCTGGTCGTGGACCAAACTACCTCATCCCAGAGATCTTGAAACCTGATATAAGTGCCCCAGGAGTTGACATATTGGCTGCTTACTCTCCAATTTCTACCCCAACACAAGACCCTGATAATGATAACAGATCTGTGAGTTACAGCATTTTGAGTGGAACTTCAATGTCTTGTCCTCATGTTTCTGGAATAGCCACATATGTGAAAAGCTTTCACCCTGATTGGTCACCTGCTGCAATTAAATCTGCTATTCTGACAACGGCAACACCTATGGTTAGAAGCTCTGTGTACGATGTTGGAGAATATGAATATGGATCTGGACAAGCTAATCCTGTTCAAGCGCTCAACCCTGGACTAGTTTATGACATTACCAAGGGAGATTATGTGCAAATGCTCTGCAACTTAGGGTATAATAATACCATAATTAAGTTGATATCTGGAGAAGTTAATCCATGCAACGGAGCTGCTGATAGATCATTGGTAAGAAACTTAAATTATCCAACTTTTGCAGCTCGGATTCTACCCAATGTGACTTTTAGCATTAGTTTTGGTAGAACAGTTACAAATGTTGGGTTGGCCAATTCAAGTTACAAGGTAACAATCACACCGAATCCAGAAGTTAAGATCACAGTGACACCAACAGTTTTATCATTCAAAGCATTAAACGAGAAAAAGTCGTTTGTAGTGGATGTGAGCGGTAAAGTACCAAGAAAAAGTGTGGTTATCTCATCAATAGTATGGTCAGATGGAATTCATAATATTAGAAGTCCAATTGTTATAGATATTTCATCAGGTGATGAGGAATGA 2214 0.4142 MANLNLVVCSVMITILVFTLFTTCDANNNNDDNPKLHIVYMGSLPETTNSYSPTSHHLNLLQQVLDGSSNPANSLVRSYKRSFNGFAAMLTNEQAAKLAEMEEVVSVFPSMTFQTQTTRSWDFLGFPKAVKRQPKSIESNLVVGVIDTGIWPESESFNDKDFTGPIPKKWKGTCAGGKNFTCNKKLIGARFYVDDSARDGLGHGSHTASTAAGNYVDNVGFFGIAQGTARGAVPSARIAAYKICNAQGCAGASILAAYDDAIADGVDIISISVGYKFAVRLEIDPNAIGSFHAMAKGILVSQSAGNSGALPSSVASIAPWLISVAANTIDRRIVDKVVLGNGKVFIGNTINPFESNRRKIPIALSNGNSGDCPKEYADRCLCLDKKLVNGKIVLCDQYSDDVLKVSGAAGGVVNVDTGNVGYVSLLPFAPLLPQDYELIKSYRNSTKDPRAEILKSESARDRNAPKVAIFSGRGPNYLIPEILKPDISAPGVDILAAYSPISTPTQDPDNDNRSVSYSILSGTSMSCPHVSGIATYVKSFHPDWSPAAIKSAILTTATPMVRSSVYDVGEYEYGSGQANPVQALNPGLVYDITKGDYVQMLCNLGYNNTIIKLISGEVNPCNGAADRSLVRNLNYPTFAARILPNVTFSISFGRTVTNVGLANSSYKVTITPNPEVKITVTPTVLSFKALNEKKSFVVDVSGKVPRKSVVISSIVWSDGIHNIRSPIVIDISSGDEE 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1399g00002 737 Gene3D - 330 460 - -
Stsc1399g00002 737 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Stsc1399g00002 737 PRINTS Subtilisin serine protease family (S8) signature 199 212 IPR015500 -
Stsc1399g00002 737 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Stsc1399g00002 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Stsc1399g00002 737 Pfam Fibronectin type-III domain 632 729 IPR041469 -
Stsc1399g00002 737 CDD Peptidases_S8_3 113 558 IPR034197 -
Stsc1399g00002 737 CDD PA_subtilisin_like 337 453 - -
Stsc1399g00002 737 Gene3D - 601 731 - -
Stsc1399g00002 737 ProSiteProfiles Serine proteases, subtilase domain profile. 120 584 - -
Stsc1399g00002 737 SUPERFAMILY Subtilisin-like 120 585 IPR036852 GO:0004252|GO:0006508
Stsc1399g00002 737 Gene3D Peptidase S8/S53 domain 141 597 IPR036852 GO:0004252|GO:0006508
Stsc1399g00002 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 728 IPR045051 -
Stsc1399g00002 737 FunFam Subtilisin-like protease SBT5.3 25 116 - -
Stsc1399g00002 737 Pfam Subtilase family 139 559 IPR000209 GO:0006508|GO:0008236
Stsc1399g00002 737 Pfam Peptidase inhibitor I9 37 115 IPR010259 -
Stsc1399g00002 737 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1399g00002 Stsc-Chr1399 9681 11894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1399g00002 26 729 Subtilisin-like Serine Gene Family AT5G59100 50.000 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1399g00002 - - qsa:O6P43_020998 795.423