LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc138g00021	ATGGAACCTCGTGTTGGTAACAAGTTTCGGCTGGGTAGGAAGATCGGTAGCGGCTCCTTTGGGGAGATCTACTTAGGTACTAATATTCAGACTAACGAAGAAGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTGTATGAGTCCAAGCTATACAGAATTCTACAAGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTCAACTTCTGTAGTAGAAAGCTGTCACTCAAGACTGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCTAAATCATTTCTACATCGGGATATTAAACCAGATAATTTTCTGAT	407	0.398	MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFL	135

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc138g00021	135	SUPERFAMILY	Protein kinase-like (PK-like)	5	135	IPR011009	-
	Stsc138g00021	135	ProSiteProfiles	Protein kinase domain profile.	9	135	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc138g00021	135	PANTHER	CASEIN KINASE-RELATED	8	135	-	-
	Stsc138g00021	135	Pfam	Protein kinase domain	10	135	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc138g00021	135	Gene3D	Transferase(Phosphotransferase) domain 1	86	135	-	-
	Stsc138g00021	135	ProSitePatterns	Protein kinases ATP-binding region signature.	15	38	IPR017441	GO:0005524
	Stsc138g00021	135	Gene3D	Phosphorylase Kinase; domain 1	2	85	-	-
	Stsc138g00021	135	FunFam	Putative Casein kinase I	1	85	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc138g00021	Stsc-Chr138	93190	94669	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc138g00021	7	135	CBL-interacting serine-threonine protein kinases	AT5G58380	30.000	8.18e-12	59.3

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1	Stsc138g00021		Pkinase	6e-18	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc138g00021	K02218		-	gmx:100785851	274.633