Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc138324g00001 ATGGCCAATGCACATGAATTTATATCAAAGTTCCCAGAGAAATACAAGACCTTTGTTGGAGAGCGTGGGGTACGGCTTTCGGGAGGGCAGAAACAGAGAATAGCAATTGCTAGAGCCCTGCTCATGGACCCCAAAATTCTCCTCCTGGATGAAGCCACCAGTGCCCTAGATGCCGAAAGCGAGTACCTAGTGCAGG 196 0.5 MANAHEFISKFPEKYKTFVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQ 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc138324g00001 65 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 65 IPR027417 -
Stsc138324g00001 65 Pfam ABC transporter 4 54 IPR003439 GO:0005524
Stsc138324g00001 65 Gene3D - 1 65 IPR027417 -
Stsc138324g00001 65 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 65 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc138324g00001 Stsc-Chr138324 2 200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc138324g00001 1 65 Calmodulin-binding Proteins AT2G36910 75.385 4.30e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc138324g00001 - - gmx:100810510 126.331