Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1373g00002 ATGGCAACTCTCAATCTTGTTGTGTGTAGTGTGATGATCACCACCTTAGCATTCACGCTTTTCACTACTTGTATTGATGCTAATCCAAAACTTCATATTGTTTACATGGGCTCTTTACCTGAAACAACAAATTCTTACTCTCCATCCTCTCACCATCTCAACTTGCTGCAACAAGTTCTTGGTGGTAGCAACCCAGCAAACTCCTTAGTCCGTAGCTACAAAAGGAGTTTTAATGGTTTTGCTGCTATGCTCACGAATGAGCAAGCCGCAAAGTTAGCAGAAATGGAAGATGTTGTGTCAGTTTTTCCAAGCATGACATTCCAAACCCAAACAACAAGATCATGGGATTTCTTAGGATTTCCAAAGGCAGTAAAAAGACAACCCAAAAGCATAGAAAGCAACCTCGTTGTGGGAGTTCTCGACACCGGAATTTGGCCTGAATCAGAAAGCTTCAATGAGAAAGATTTCACTGGCCCTGTTCCAAAGAAGTGGAAGGGTACTTGTGCAGGTGGCAAAAACTTCACATGCAACAAGAAGCTAATTGGAGCAAGATTCTATGTAGATCACTCTGCAAGAGACGGTGACGGCCATGGAAGCCATACAGCATCAATAGCAGCAGGAAACTATGTTGATAATGTTGGCTTCTTTGGCATTGCACAAGGCACTGCCAGGGGAGCAGTTCCTTCTGCAAGAATTGCTGCTTATAAAATATGTAATGATGAAGGCTGTGATGGTGATGGCATCTTAGCTGCCTTTGATGATGCAATTGCTGATGGAGTTGACATCATTTCCATTTCAGTTGGTCCTCCAATCCCACTGAATCTAGAAACTGATCCTATTGCCATTGGTGCGTTTCATGCAATGGCCAAAGGGGTACTTGTATCCCAATCAGCTGGTAATTCCGGCCCTTTACCTGCCTCAGTATCAAGCATAGCACCATGGTTGATAAGTGTAGCAGCAAACACTATAGACCGCCGGATTGTCAACAAGGTGGTTCTTGGCAACGGAAAAGTGTTGACCGGAAATTCGGTTAATACTTTCGAGTCGAACGGAAGGAAAATTCCTATAGCATTGAGTAACGGCAATTTAAGTGAGTGTATAAAAGAATTAGCTGATCAGTGTCAATGCTTGGATCAAAAACTGGTGAGAGGAAAGATAGTTTTATGTGACCTGTATAACGATGGTATACCCAAAGTTTCTGGTGCAGCTGGTGCAGTTGTAAATACTGATACTGGTAACGTGGGTTACGTTGCTTTATTGCCATTCGCGGCATTGGTACCAAAAGATTATGAATTGATCAAATCCTACACAAACTCAACAAAGGATCCAAGGGCTGAGATTCTCAAGAGTGAGATTGCTAGTGATCGTAATGCTCCTAAAGTGGCAATATTTTCTTCTCGTGGACCAAACTACTTCATTTCACAGATCTTGAAACCTGATGTAAGTGCCCCTGGAGTTGACATATTGGCTGCTTATTCACCAATTTCTACACCAACAGAAAATTCTAAGTATGATAACAGATCTGTGAGTTACAGCATTTTGAGTGGAACTTCAATGTCTTGTCCTCATGTTTCTGGAATAGCCACATATGTGAAAAGCTTTCACCCTGATTGGTCACCTGCTGCAATTAAATCTGCTATTCTGACATCAGCAACACCCATGGTTAGAAGCTCTGTGCATGATGTTGGAGAATATGCATATGGATCTGGGCAAGCCAATCCTGTTCAAGCACTCAACCCTGGACTAGTTTACGACATTACCAAGGGAGATTATGTGCAAATGCTCTGCAACTTCGGGTATGATAATGCCACAGTTAAGTTGATATCTGGAGAGGTTAATCCATGCAAGGGAGCTGCAAATACAGCATTGGTATCAAGCTTGAATTATCCAACTTTTGCAGGTCGTATTCTACCCAACGTGGCTTATAACATAAGGTTTGGTAGAACAGTTACAAATGTTGGGTTTGCCAATTCAACTTACAGGGTAACAATCACACCGAATCCAGAACTTAAGATCACAGTGACACCAAGCGTTTTGTCATTCAAAACATTGAACGAGAAAAAATCGTTTGTGGTGAATGTGAGTGGTAAGGTACCAAGAAAAAGTGTGGTTATCTCATCAATTGTGTGGTCAGATGGAACCCATAATGTTAGAAGCCCAATTGTTATAGATGTTTTATCAGTTGATCAGGATAAATTGTGA 2202 0.4164 MATLNLVVCSVMITTLAFTLFTTCIDANPKLHIVYMGSLPETTNSYSPSSHHLNLLQQVLGGSNPANSLVRSYKRSFNGFAAMLTNEQAAKLAEMEDVVSVFPSMTFQTQTTRSWDFLGFPKAVKRQPKSIESNLVVGVLDTGIWPESESFNEKDFTGPVPKKWKGTCAGGKNFTCNKKLIGARFYVDHSARDGDGHGSHTASIAAGNYVDNVGFFGIAQGTARGAVPSARIAAYKICNDEGCDGDGILAAFDDAIADGVDIISISVGPPIPLNLETDPIAIGAFHAMAKGVLVSQSAGNSGPLPASVSSIAPWLISVAANTIDRRIVNKVVLGNGKVLTGNSVNTFESNGRKIPIALSNGNLSECIKELADQCQCLDQKLVRGKIVLCDLYNDGIPKVSGAAGAVVNTDTGNVGYVALLPFAALVPKDYELIKSYTNSTKDPRAEILKSEIASDRNAPKVAIFSSRGPNYFISQILKPDVSAPGVDILAAYSPISTPTENSKYDNRSVSYSILSGTSMSCPHVSGIATYVKSFHPDWSPAAIKSAILTSATPMVRSSVHDVGEYAYGSGQANPVQALNPGLVYDITKGDYVQMLCNFGYDNATVKLISGEVNPCKGAANTALVSSLNYPTFAGRILPNVAYNIRFGRTVTNVGFANSTYRVTITPNPELKITVTPSVLSFKTLNEKKSFVVNVSGKVPRKSVVISSIVWSDGTHNVRSPIVIDVLSVDQDKL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1373g00002 733 Pfam Subtilase family 133 554 IPR000209 GO:0006508|GO:0008236
Stsc1373g00002 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 722 IPR045051 -
Stsc1373g00002 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 109 IPR037045 -
Stsc1373g00002 733 Gene3D - 324 454 - -
Stsc1373g00002 733 PRINTS Subtilisin serine protease family (S8) signature 515 531 IPR015500 -
Stsc1373g00002 733 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Stsc1373g00002 733 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Stsc1373g00002 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 516 526 IPR023828 -
Stsc1373g00002 733 Gene3D Peptidase S8/S53 domain 135 591 IPR036852 GO:0004252|GO:0006508
Stsc1373g00002 733 ProSiteProfiles Serine proteases, subtilase domain profile. 114 578 - -
Stsc1373g00002 733 Pfam Peptidase inhibitor I9 32 109 IPR010259 -
Stsc1373g00002 733 FunFam Subtilisin-like protease SBT5.3 22 110 - -
Stsc1373g00002 733 SUPERFAMILY Subtilisin-like 110 582 IPR036852 GO:0004252|GO:0006508
Stsc1373g00002 733 CDD Peptidases_S8_3 107 552 IPR034197 -
Stsc1373g00002 733 Gene3D - 595 726 - -
Stsc1373g00002 733 CDD PA_subtilisin_like 331 447 - -
Stsc1373g00002 733 Pfam Fibronectin type-III domain 627 723 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1373g00002 Stsc-Chr1373 8762 10963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1373g00002 28 727 Subtilisin-like Serine Gene Family AT5G59100 52.368 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1373g00002 - - psat:127076787 799.275