Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc136g00002 ATGCCAGGTTTCATAAGTTTGGATTGTGGGGGTAATGAAAATTTCACTGATGAAATTGGTATTGAATGGACTCCTGATGAAAAACTGACTTATGGCGAAATAAGCACTATATCGGTTGCCAATGAGACACGAAAGCAATACAAGACACTTCGGCACTTCCCTGCGGATTCCAGGAAATACTGCTACACACTTGATGTTAACAGTAGAACAAGATACCTGCTGAGGGCATCATTCTTGTATGGGAACTTTGATGAGAACAATGTTTATCCGAAATTCGACATTTCTGTTGGAGCAACTCATTGGTCTACTATTGTTATATCTGATGCTGAGACTATTGAAGTGATAGAGCTTATCTTTCTGGCTACAAGTCCTAAAGTTAGTGTATGTTTATCAAATGCGACAACCGGGAAGCCGTTTATTTCTACACTTGAACTCCGGCAATTCAATGGTTCTGTTTATTATACAGAAATCGAGGAACAGTACTACCTCAGTGTCTCTGCTAGGATCAATTTTGGTGCTGAGAGTAACGATCCTGTCAGGTATCCTGATGATCCATTCGATAGAATTTGGCAGTCAGATTCTATCAAGAAAGCCAATTATCTTGTCGATGTTGCTGCTGGAACTCAGAAAATTTCAACCAATATGACAATTGATGTTAACAGAGATGAAATGCCACCGGTAAAAGTAATGCAGACAGCTGTAATTGGTACAAATGGGTCCTTAACTTACCGGCTAAACTTGGATGGTTTTCCTGGAATGGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGATTTGCCAAAAGATGAATCAAGAAAATTCAGGCTAGTACTTCCGGGTCACAATGATATGAGCAAGGCTGTGGTAAATATTGAGGAAAATGCTCAAGGGAAATATCACCTTTACGAACCAGGATATACTAATTTATCCCTACCGTTTGTGCTGTCCTTTAAATTTAGCAAGACATCTGATTCTACCAGGGGTCCTCTTCTAAATGCCATGGAGATAAATAAGTATCTAGAGAAAAATGATGGCTCTCCTGACGGTGATACTATATCAGCAGTAGTTTCACACTACTCTTCAGCTGACTGGGCACAAGAAGGGGGTGATCCTTGCCTACCAGCTCCGTGGTCCTGGGTCCGCTGTAGCTCAGATCCACAGCCAAGAATTGTTTCAATTTTATTGTCAGGTAAAAACTTGACAGGCAATATTCCGTTGGACATTGCCAAATTGACTGGTCTTGTTGAAATATGGCTTGATGGAAATATGTTGACTGGTACAATACCCGATTTTACTGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAACCACTTAACAGGTCAATTACCTTCCTCCTTGGCGAACCTTCGAAATTTGAGGGAACTGTATGTACAAAATAATATGTTATCTGGAACAGTACCTTCAGATCTTCTGAGTGAAGATTTGGTCATAAATTACACCGGAAACATTAATCTTCATAAGAAAAGTGGGAAACAAAGCCATATGATTGTGATCATAGGTTCATCTGCTGGTGCTGCGGTTCTTCTTCTGGCAACTATAGTCTCTTGCTTGTTTTTGCGTAAAGGAAAGAAAAAATATCATGAGCAAGACAAACTTGTCTCTCGCCCGTCTCAAACTATCAGTTCTTCCGTGAGTGAAGTTCCTTCAAATGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAGTTCAACCAATAACTTTGAGAGAAAAATTGGTTCCGGGGGTTTTGGAGTTGTTTACTATGGGAGACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACCAGTAATTCCTACCAAGGCAAACGAGAGTTCTCCAACGAGGTGACTCTTCTATCAAGAATTCATCACAGAAACTTGGTACAGCTTCTCGGTTATTGCCGTGAAGAAGGGAATAGCATGCTTATTTATGAGTACATGCATAACGGGACTCTCAAAGAGCATCTTTACGGTCCATTAACACATGGACGAAGCATCAATTGGATTAAACGCCTCGAGATTGCAGAAGATGCTGCAAAAGGAATAGAATATCTTCATACAGGATGTGTTCCTGCCGTCATACATAGAGACTTAAAAACCAGCAATATTCTTGTTGACAAGCAAATGCGAGCCAAGGTTTCAGATTTTGGCCTTTCAAAACTTGCTGTTGATGGAGCTTCCCATGTCTCTAGCATTGTTCGGGGGACAGTAGGATATCTTGACCCTGAGTACTATATTTCTCAGCAGCTGACTGACAAGAGTGATATTTATAGTTTTGGAGTTATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCAAATGACAGCTTTGGAGCTAATTGCCGAAACATAGTCCAGTGGGCAAAATTTCACATTGAGAGTGGAGACATTCAAGGTATCATTGATCCCGTGCTAAGGAACAATTATGATCTACAATCGATGTGGAAAATAGCGGAGAAAGCATTGATGTGTGTTCAACCGCACGGACATATGCGGCCACCGATATCAGAAGTTCTCAAGGAGATACAAGATGCGATCGCCATCGAGAGAGAGGCCGGAGGCAATTCAGATGAGTTATCAAGAAATTCTCTTCATTCTTCCATCAACATTATTGGTTCCATGGATCTGGCAGTAACTGACAACTTCGTGTCGATTGATGAATCCATGGCACAGCCTACTGCTAGATAG 2706 0.4072 MPGFISLDCGGNENFTDEIGIEWTPDEKLTYGEISTISVANETRKQYKTLRHFPADSRKYCYTLDVNSRTRYLLRASFLYGNFDENNVYPKFDISVGATHWSTIVISDAETIEVIELIFLATSPKVSVCLSNATTGKPFISTLELRQFNGSVYYTEIEEQYYLSVSARINFGAESNDPVRYPDDPFDRIWQSDSIKKANYLVDVAAGTQKISTNMTIDVNRDEMPPVKVMQTAVIGTNGSLTYRLNLDGFPGMGWAFTYFAEIEDLPKDESRKFRLVLPGHNDMSKAVVNIEENAQGKYHLYEPGYTNLSLPFVLSFKFSKTSDSTRGPLLNAMEINKYLEKNDGSPDGDTISAVVSHYSSADWAQEGGDPCLPAPWSWVRCSSDPQPRIVSILLSGKNLTGNIPLDIAKLTGLVEIWLDGNMLTGTIPDFTGCMDLKIIHLENNHLTGQLPSSLANLRNLRELYVQNNMLSGTVPSDLLSEDLVINYTGNINLHKKSGKQSHMIVIIGSSAGAAVLLLATIVSCLFLRKGKKKYHEQDKLVSRPSQTISSSVSEVPSNAEAAHCFSFSEIESSTNNFERKIGSGGFGVVYYGRLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEGNSMLIYEYMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDAAKGIEYLHTGCVPAVIHRDLKTSNILVDKQMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKFHIESGDIQGIIDPVLRNNYDLQSMWKIAEKALMCVQPHGHMRPPISEVLKEIQDAIAIEREAGGNSDELSRNSLHSSINIIGSMDLAVTDNFVSIDESMAQPTAR 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc136g00002 901 Gene3D Transferase(Phosphotransferase) domain 1 652 869 - -
Stsc136g00002 901 Gene3D Ribonuclease Inhibitor 352 501 IPR032675 -
Stsc136g00002 901 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 652 860 - -
Stsc136g00002 901 FunFam Leucine-rich repeat protein kinase family protein 350 500 - -
Stsc136g00002 901 Gene3D Phosphorylase Kinase; domain 1 550 651 - -
Stsc136g00002 901 SUPERFAMILY Protein kinase-like (PK-like) 556 846 IPR011009 -
Stsc136g00002 901 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Stsc136g00002 901 FunFam Leucine-rich repeat receptor-like protein kinase 554 651 - -
Stsc136g00002 901 CDD STKc_IRAK 582 849 - -
Stsc136g00002 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Stsc136g00002 901 ProSiteProfiles Protein kinase domain profile. 576 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc136g00002 901 SUPERFAMILY L domain-like 376 479 - -
Stsc136g00002 901 Pfam Protein tyrosine and serine/threonine kinase 578 778 IPR001245 GO:0004672|GO:0006468
Stsc136g00002 901 PANTHER OS07G0107800 PROTEIN-RELATED 437 852 - -
Stsc136g00002 901 Pfam Malectin-like domain 7 337 IPR024788 -
Stsc136g00002 901 SMART serkin_6 576 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc136g00002 Stsc-Chr136 4823 11047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc136g00002 2 686 Receptor kinase-like Gene Family AT2G37050 67.341 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc136g00002 Malectin_like 1.1e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc136g00002 - - gmx:100798007 1568.52